prot_L-elsbetiae_contig5576.13891.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5576.13891.1
Unique Nameprot_L-elsbetiae_contig5576.13891.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length151
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5576.13891.1 vs. uniprot
Match: A0A6H5KB40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB40_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.200e-20
Identity = 79/155 (50.97%), Postives = 91/155 (58.71%), Query Frame = 0 
Query:    1 VVLKISVGLP-AGAESGGAEGTYGVSGGTTKAIP-ATKSWSTQVVAQTFGAAADSSTALCFRAHVHMPALVLSVVPNVAATAVGGG-----GAMEVAVSLRSRGTHQGNSSA---GFAALGGDSGNHGSSGRAGSGED---EVWAVGTVRVPLPP 142
            VVLKISV LP A   SGGA  +    G   + I  AT+ WS +VVA+ FGA ADSSTALCFRA VH+PA      P++ A   G       G MEVAV LRSRG  Q +  A   GF ALG  S     + R+G GE+   EVWAVG V VPLPP
Sbjct: 1255 VVLKISVELPPAAVASGGAADSLRAQGDPKREISMATRKWSKEVVAELFGAPADSSTALCFRAQVHLPACSP---PSLPAARNGXXXXXXXGVMEVAVCLRSRGKQQPDERANDTGFVALGSSSRGGADAHRSGGGENGEKEVWAVGKVAVPLPP 1406
[Close]
BLAST of mRNA_L-elsbetiae_contig5576.13891.1 vs. uniprot
Match: D8LGT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGT4_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 2.610e-19
Identity = 78/168 (46.43%), Postives = 89/168 (52.98%), Query Frame = 0 
Query:    1 VVLKISVGLP-AGAESGGAEGTYGVSGGTTKAIPA-TKSWSTQVVAQTFGAAADSSTALCFRAHVHMPALVLSVVPNVA-----------------ATAVGGGGAMEVAVSLRSRGTHQGNSSA---GFAALG----GDSGNHGSSGRAGSGEDEVWAVGTVRVPLPP 142
            VVLKISV LP A   SGG   +    G   + I A T+ WS +VVA+ FGA ADSST LCFRA VH+PA     +P                      + G GG MEV V LRSRG  Q +  A   GF ALG    G +  HGS G  G+GE EVW VG V VPLPP
Sbjct: 1180 VVLKISVELPPAAVASGGGADSLRSQGDPKRGISAATRKWSKEVVAEMFGAPADSSTVLCFRAQVHLPAFSPPSLPTARNGXXXXXXXXXXXXXXXXXSAGVGGVMEVTVCLRSRGKQQHDERANDTGFVALGSSSRGGADAHGSGG-GGNGEKEVWTVGKVAVPLPP 1346
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5576.13891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KB40_9PHAE2.200e-2050.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGT4_ECTSI2.610e-1946.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5576contigL-elsbetiae_contig5576:8094..9212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5576.13891.1mRNA_L-elsbetiae_contig5576.13891.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5576 7729..9212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5576.13891.1 ID=prot_L-elsbetiae_contig5576.13891.1|Name=mRNA_L-elsbetiae_contig5576.13891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp
VVLKISVGLPAGAESGGAEGTYGVSGGTTKAIPATKSWSTQVVAQTFGAA
ADSSTALCFRAHVHMPALVLSVVPNVAATAVGGGGAMEVAVSLRSRGTHQ
GNSSAGFAALGGDSGNHGSSGRAGSGEDEVWAVGTVRVPLPPFLSPPGTW
*
back to top