prot_L-elsbetiae_contig547.13730.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig547.13730.1
Unique Nameprot_L-elsbetiae_contig547.13730.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length497
Homology
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BLAST of mRNA_L-elsbetiae_contig547.13730.1 vs. uniprot
Match: D7FRM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRM1_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.590e-50
Identity = 132/235 (56.17%), Postives = 161/235 (68.51%), Query Frame = 0 
Query:  245 LPLLSPEQEILSNGIKMCRERLVPLRRRKSDVVGGGVRARASSNSSGSTGAPTSAGSESSLSKRRSSTSALRSSDMSRPSTTNSVNTARERGSSGRISRSSESGTGLAADQGHLKARLRVMEWKRRRAEEIKTQQEEQATLEQLQQAEAETEAARKLAAARAEEAEQRIAAGRESTAEAVRATESAEKWAKTSRQRERRRAEVYAINAVMRTSFEREFEAYSLEQETLTARAAAP 479
            LPLLSPEQE+   G+   ++RL PL RRKSDV G     R S N S +   P S+G E SL++RRS+T      D SRPSTT++ NTARE   S R S SSE+ T   ADQ  LKARLRVMEWKRRRAEE+++QQEEQAT E                   AEEAE+RI A   ++A+AVRA+E+AE+WAK SR+RERRRAE+YAINAVMR +FE+EF+AYSLEQE    +A+AP
Sbjct:   85 LPLLSPEQELTGKGVGKLKQRLAPLHRRKSDVDG--RFRRRSRNLSSAQRKPASSGQEPSLARRRSTTP-----DASRPSTTSNTNTAREGVPSSRTSFSSETATDPGADQAQLKARLRVMEWKRRRAEELESQQEEQATQEHXXXXXXXXXXXXXXXXXXAEEAERRILAEHNNSADAVRASEAAERWAKASRERERRRAEIYAINAVMRAAFEKEFKAYSLEQENRVTQASAP 312
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig547.13730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRM1_ECTSI1.590e-5056.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 371..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig547contigL-elsbetiae_contig547:16617..19566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig547.13730.1mRNA_L-elsbetiae_contig547.13730.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig547 16617..19713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig547.13730.1 ID=prot_L-elsbetiae_contig547.13730.1|Name=mRNA_L-elsbetiae_contig547.13730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=497bp
MALVTLKWPSASGRVDRASMMEAGIPRRRTLSSTNGRRQETPRDVIASRC
RTAKNISVSRSKSNFQPKPPPPQGRRRAEHNMSFQQGSKSTHVNTGLATT
QPRKSQPVPAPKPASSNNTVKAEIISISVPNIVRESTATVGLRLLSTDGC
SAGAPSSSAIIALNIPLSTNCLSSCRPTDEKSPLIGERVKSGCSTSETAG
SLANTTRSCWDERGGSVDTPADAASPPLPRYGSASSTGNKAATSLPLLSP
EQEILSNGIKMCRERLVPLRRRKSDVVGGGVRARASSNSSGSTGAPTSAG
SESSLSKRRSSTSALRSSDMSRPSTTNSVNTARERGSSGRISRSSESGTG
LAADQGHLKARLRVMEWKRRRAEEIKTQQEEQATLEQLQQAEAETEAARK
LAAARAEEAEQRIAAGRESTAEAVRATESAEKWAKTSRQRERRRAEVYAI
NAVMRTSFEREFEAYSLEQETLTARAAAPASPAQALTGKEASPQQQ*
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