prot_L-elsbetiae_contig5421.13657.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5421.13657.1
Unique Nameprot_L-elsbetiae_contig5421.13657.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length282
Homology
BLAST of mRNA_L-elsbetiae_contig5421.13657.1 vs. uniprot
Match: D8LRE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE3_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.310e-47
Identity = 91/154 (59.09%), Postives = 109/154 (70.78%), Query Frame = 0
Query:  120 RSASSSSLREEEWHMPAVLLTALEANGVILPTPLQEAVWKGGRGHARVDLIVHGRPGDETATAFCVPILERVLERYPAGLSPEGGGGSAGMPARAPSXXXXXXXXXXGA--QVYELVALVLTRTREMATDIAETLACLGQNIPSLSVATLIGGV 271
            R  S++SLRE + ++PA LL +L+ANGV LPTPLQE+VW  GRG  R DL+VH RPGDETATA+CVP+LERVLERYP  L      G     ARAP+          GA  + YE+VALVLTRTR+MA+D+   L  LG+ IPSLSVATLIGGV
Sbjct:    3 RCGSTASLREAKRNIPAELLASLDANGVTLPTPLQESVWSIGRGAGREDLLVHARPGDETATAYCVPVLERVLERYPQPLC-----GDCEQAARAPAPSGGGGAACTGADREKYEVVALVLTRTRDMASDVTTMLTRLGEGIPSLSVATLIGGV 151          
BLAST of mRNA_L-elsbetiae_contig5421.13657.1 vs. uniprot
Match: A0A6H5KKW2_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW2_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.160e-10
Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = 0
Query:  118 VPRSASSSSLREEEWHMPAVLLTALEANGVILPTPLQEAVWKGGRGHARVDLIVH 172
            V RS S++SLRE + ++PAVLL +LEANGV LPTPLQE+VW  GRG  R DL+VH
Sbjct:  669 VRRSGSTASLREAKRNIPAVLLASLEANGVTLPTPLQESVWSIGRGADREDLLVH 723          
BLAST of mRNA_L-elsbetiae_contig5421.13657.1 vs. uniprot
Match: D8LRE2_ECTSI (DEAD domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE2_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 7.760e-9
Identity = 57/181 (31.49%), Postives = 86/181 (47.51%), Query Frame = 0
Query:  134 MPAVLLTALEANGVILPTPLQEAVWKGGRGHARVDLIVHGRPGDETATAFCVPILERV----------LERYP-------AGLS--------------PEGGGGSAGMPARAPSXXXXXXXXXXGAQVYELVALVLTRTREMATDIAETLACLGQ-NIPSLSVATLIGGVPVAENHKALAA 282
            +P  L  +LEA  V + TPLQ +VW   R  A  DL++  + G ET TA  V +L+R+          L RY        +GLS                  G S      +            G    +L ALVLT+ RE+A  + +TL  LG+ ++P+L++A+L+GG+ V+EN + L+A
Sbjct:    3 LPPALQKSLEAEEVQV-TPLQASVWSEAR--AGADLLIEAKSGPETTTALAVLVLDRLVAAISSAEAALPRYARKRTSSFSGLSGLNRIVSSVLRTTSSNNNGNSNVKDGESDLSTANGSSGSGGLLKPQLCALVLTKNREVAAGVKDTLLRLGKTSVPNLTIASLVGGIAVSENAQTLSA 180          
BLAST of mRNA_L-elsbetiae_contig5421.13657.1 vs. uniprot
Match: A0A1C2G425_9GAMM (Uncharacterized protein n=3 Tax=Acidiferrobacter TaxID=986106 RepID=A0A1C2G425_9GAMM)

HSP 1 Score: 54.7 bits (130), Expect = 7.630e-5
Identity = 45/152 (29.61%), Postives = 63/152 (41.45%), Query Frame = 0
Query:  133 HMPAVLLTALEANGVILPTPLQEAVWKG---GRGHARVDLIVHGRPGDETATAFCVPILERV-LERYPAGLSPEGGGGSAGMPARAPSXXXXXXXXXXGAQVYELVALVLTRTREMATDIAETLACLGQNIPSLSVATLIGGVPVAENHKAL 280
            ++ A LL ALEA G   PTP+Q +       GR     D++   + G     AF +P L+R+   R PAG  P                                 ALVLT TRE+AT + +  +   + +P L   T++GGVP     K L
Sbjct:    7 NLAAPLLNALEAAGYEKPTPIQASAIPAVLAGR-----DVMACAQTGTGKTAAFLLPTLQRLETRRAPAGRGPR--------------------------------ALVLTPTRELATQVRDAASVYAKGLPHLRFGTIVGGVPYPPQEKLL 121          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5421.13657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LRE3_ECTSI1.310e-4759.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKW2_9PHAE3.160e-1065.45DEAD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRE2_ECTSI7.760e-931.49DEAD domain-containing protein (Fragment) n=1 Tax=... [more]
A0A1C2G425_9GAMM7.630e-529.61Uncharacterized protein n=3 Tax=Acidiferrobacter T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 77..282
e-value: 9.7E-14
score: 53.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 125..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5421contigL-elsbetiae_contig5421:9853..12165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5421.13657.1mRNA_L-elsbetiae_contig5421.13657.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5421 9839..12165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5421.13657.1 ID=prot_L-elsbetiae_contig5421.13657.1|Name=mRNA_L-elsbetiae_contig5421.13657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=282bp
MVAAVGKQRNLCPSAGRGGGGMGSSSSSSSSSSSSSLAPSPGAVVVPSSE
RRLAVPAPAGAGTGNPPRGAETEEELETRRRTGESVAVAEEKGKGQEHEA
EPIQRKTTPPQTQAHLLVPRSASSSSLREEEWHMPAVLLTALEANGVILP
TPLQEAVWKGGRGHARVDLIVHGRPGDETATAFCVPILERVLERYPAGLS
PEGGGGSAGMPARAPSSEATTPPPPPGAQVYELVALVLTRTREMATDIAE
TLACLGQNIPSLSVATLIGGVPVAENHKALAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase