prot_L-elsbetiae_contig540.13624.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig540.13624.1
Unique Nameprot_L-elsbetiae_contig540.13624.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length96
Homology
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BLAST of mRNA_L-elsbetiae_contig540.13624.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 3.010e-19
Identity = 48/63 (76.19%), Postives = 53/63 (84.13%), Query Frame = 0 
Query:    3 AIALLLTLWALHREFPRLGESALLALAACCLARELVGGPATLPSSEFRVPLLHDPRALLAAAS 65
            AIALLL LWALHRE PRLGE+A+L LA   LARE VGG ATLPS+  RVPLLHDPRAL+AAA+
Sbjct:  390 AIALLLILWALHRESPRLGETAMLGLAVALLARECVGGAATLPSANRRVPLLHDPRALVAAAA 452
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BLAST of mRNA_L-elsbetiae_contig540.13624.1 vs. uniprot
Match: A0A6H5JPN1_9PHAE (CRAL-TRIO domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN1_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 3.580e-18
Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    3 AIALLLTLWALHREFPRLGESALLALAACCLARELVGGPATLPSSEFRVPLLHDPRALLAAAS 65
            AIALLL LWAL RE PRLGE+A+L LA   LARE VGG ATLPS+  RVPLLHDPRAL+AAA+
Sbjct:  226 AIALLLILWALQRESPRLGETAILGLAVALLARECVGGAATLPSASRRVPLLHDPRALVAAAA 288
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig540.13624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI57_ECTSI3.010e-1976.19CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JPN1_9PHAE3.580e-1874.60CRAL-TRIO domain-containing protein (Fragment) n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.536

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig540contigL-elsbetiae_contig540:16785..17072 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig540.13624.1mRNA_L-elsbetiae_contig540.13624.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig540 16785..17074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig540.13624.1 ID=prot_L-elsbetiae_contig540.13624.1|Name=mRNA_L-elsbetiae_contig540.13624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp
AHAIALLLTLWALHREFPRLGESALLALAACCLARELVGGPATLPSSEFR
VPLLHDPRALLAAASKGSDGSSSGGGGRGRLVGGRCGNLGGDGVGG
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