prot_L-elsbetiae_contig536.13548.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig536.13548.1
Unique Nameprot_L-elsbetiae_contig536.13548.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length204
Homology
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BLAST of mRNA_L-elsbetiae_contig536.13548.1 vs. uniprot
Match: D8LNL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL1_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 1.020e-60
Identity = 115/197 (58.38%), Postives = 138/197 (70.05%), Query Frame = 0 
Query:   14 PGSPTMGSEGQQWVP----RSARAYTVADPAS--VANAREHH-ASLVYEIVFPQPGALGLNLRSHCVQKPAGARLGLPEYGCLRVQDCQSTWLKLVVNGGDLLISVNGEKLTGTSFSFAESISLCSRASLPRVFRFARLGNEASSAEIELALAGDV-CAVFDAVDTPHKRLVTAQLHPSAPPFFFLNAPTRQPVGTP 202
            P +P MG EG +  P      A A   AD AS  VA A +H    LVYEI FPQ GALGLNLR++  ++PAGARLGLP YG L V D Q  +LK +V  GDLL+++NG+KLTG+ FSF ++I++CSRASLPRV RFAR+   AS+AEIE A   DV CA FDA+D P +RLVTAQLHPSAP  FFLN PTR+   TP
Sbjct:   43 PKAPGMGVEGPREEPWAAAEGAAAAAAADHASANVAKAGDHDDTGLVYEIAFPQAGALGLNLRTYLAEQPAGARLGLPPYGSLEVLDAQKFYLKAIVEPGDLLVAINGKKLTGSRFSFEDAIAVCSRASLPRVLRFARMKG-ASAAEIECAFGADVVCATFDAMDAPQQRLVTAQLHPSAPSHFFLNPPTRRGTKTP 238
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BLAST of mRNA_L-elsbetiae_contig536.13548.1 vs. uniprot
Match: A0A6H5K263_9PHAE (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K263_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.050e-13
Identity = 52/109 (47.71%), Postives = 63/109 (57.80%), Query Frame = 0 
Query:   14 PGSPTMGSEGQQWVPRSARAYTVA---DP------------------ASVANAREHH-ASLVYEIVFPQPGALGLNLRSHCVQKPAGARLGLPEYGCLRVQDCQSTWLK 100
            P +P MG EG +  P +A   +VA   DP                  A+VA A +H  A LVYEI FPQPGALGLNLR++  ++PAGARLGLP YG L V D Q  +LK
Sbjct:  237 PRAPGMGVEGPREEPWAAAEGSVAARPDPGPXXXXXXXXXXXSDHPSANVAKAGDHDDAGLVYEIAFPQPGALGLNLRTYLAEQPAGARLGLPPYGSLEVLDAQKFYLK 345
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig536.13548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNL1_ECTSI1.020e-6058.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K263_9PHAE1.050e-1347.71AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig536contigL-elsbetiae_contig536:13090..15367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig536.13548.1mRNA_L-elsbetiae_contig536.13548.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig536 11949..15921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig536.13548.1 ID=prot_L-elsbetiae_contig536.13548.1|Name=mRNA_L-elsbetiae_contig536.13548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp
MSEVLFGRQPSAGPGSPTMGSEGQQWVPRSARAYTVADPASVANAREHHA
SLVYEIVFPQPGALGLNLRSHCVQKPAGARLGLPEYGCLRVQDCQSTWLK
LVVNGGDLLISVNGEKLTGTSFSFAESISLCSRASLPRVFRFARLGNEAS
SAEIELALAGDVCAVFDAVDTPHKRLVTAQLHPSAPPFFFLNAPTRQPVG
TPQ*
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