prot_L-elsbetiae_contig5351.13533.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5351.13533.1
Unique Nameprot_L-elsbetiae_contig5351.13533.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length151
Homology
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BLAST of mRNA_L-elsbetiae_contig5351.13533.1 vs. uniprot
Match: D8LJT5_ECTSI (Temporarily Assigned Gene name family member (Tag-262) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT5_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.050e-25
Identity = 74/105 (70.48%), Postives = 80/105 (76.19%), Query Frame = 0 
Query:    1 MADEDALFAEFMGEIKSTVVATE----------DDGAASDTASVGDVNVDNDEGGK--KEDAETNKRRGE--ASPSPAAKKPKFMGKLVAAALPVKAGAIASAST 91
            MADEDALFAEFMGEIKSTVVA E          DDGAASD ASVGDV  D+ EGG   +  A+T KRRGE  ASPSPA KKP+FMGKLVAAA PVKAGA+A+AST
Sbjct:    1 MADEDALFAEFMGEIKSTVVAAETKGAADAGEEDDGAASDAASVGDVKADDAEGGGEGRNHADTTKRRGETEASPSPAPKKPRFMGKLVAAARPVKAGAVAAAST 105
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BLAST of mRNA_L-elsbetiae_contig5351.13533.1 vs. uniprot
Match: A0A6H5KAJ6_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAJ6_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 3.610e-24
Identity = 71/103 (68.93%), Postives = 78/103 (75.73%), Query Frame = 0 
Query:    1 MADEDALFAEFMGEIKSTVVATE---------DDGAASDTASVGDVNVDNDEGG--KKEDAETNKRRG-EASPSPAAKKPKFMGKLVAAALPVKAGAIASAST 91
            M+DEDA+FAEFMGEIKSTVVA E         DDGAASD ASVGDV  D  EGG   +  A+T KRR  EASPSPA KKP+FMGKLVAAA PVKAGA+A+AST
Sbjct:    1 MSDEDAIFAEFMGEIKSTVVAAETKTASDAGEDDGAASDAASVGDVQADGTEGGGEARNHADTTKRRETEASPSPAPKKPRFMGKLVAAAPPVKAGAVAAAST 103
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5351.13533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJT5_ECTSI1.050e-2570.48Temporarily Assigned Gene name family member (Tag-... [more]
A0A6H5KAJ6_9PHAE3.610e-2468.93RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5351contigL-elsbetiae_contig5351:10620..12375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5351.13533.1mRNA_L-elsbetiae_contig5351.13533.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5351 10483..12375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5351.13533.1 ID=prot_L-elsbetiae_contig5351.13533.1|Name=mRNA_L-elsbetiae_contig5351.13533.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp
MADEDALFAEFMGEIKSTVVATEDDGAASDTASVGDVNVDNDEGGKKEDA
ETNKRRGEASPSPAAKKPKFMGKLVAAALPVKAGAIASASTASASSVAAE
KSSKTTTTGASKVGLVAAVAAVSSAKAKAKSANGSAAAAAAASDGATGDK
Q
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