prot_L-elsbetiae_contig5343.13523.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5343.13523.1
Unique Nameprot_L-elsbetiae_contig5343.13523.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length644
Homology
BLAST of mRNA_L-elsbetiae_contig5343.13523.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI)

HSP 1 Score: 468 bits (1205), Expect = 1.730e-142
Identity = 341/626 (54.47%), Postives = 377/626 (60.22%), Query Frame = 0
Query:    1 RTVLVNASSQPXXXXXXVVQPACLILERLAGETFPLVQYDFVDLVYTLLEMAASRFLDVSLVCIGHLRLCARHLAEGDVDVALQRPLPEVTVSNTGQLPPEVLNAVRADHGGGXXXXXXXXXXXXXXXXXXXXXXXGSTG----REREAARSDAVGHLTLDLATLGSPILGEE-GGEXXXXXXRPGTAAAVDAGAAATRESGHRIGRQEEXXXXXXXXXXXKAGRISLTSAAATAATGWGIGAVRHTRLALQLWWPLLAGLAGGAGDPRLDCRAAALSTLQDVLKEFGSAPEFSPRVWPFLLTRILLPVSRHVVRTTPSVPPPALPPSLLGSNAPPPSTPSRHSRHRRAQSALSMTAPSALPSPRSGPFRL--------------PLASVGVGDTEAPGPASAGVFPLDVDSWVHTTAPQLFRAAVSVVASNAQTAAPLGVPTLLAFFEPHICCRXXXXXXHDGEIGESGGGRSRAGSLSSNLSCPRADRREAGSTAAAAKKESERQTGPDDGRGPGSGDNGDPGRYPEGEVGAAVAAGA---------------------AVAEEAGVSGDGLMSRMALESVGLLVEGLAGQNKQASPA-VLAHLCGCLVHMLDCCLPDSFGLEG 585
            +TVL    S        VVQPACLILE LAGETFPLVQYDFVDLVYTLLEMAASRFLDVSLVCIGHLRLCAR LAEG VDVALQRPLPE T+SNTGQLPPEVL AVRAD+GGGXXXXXXXXXXXXXXXXXXXXXXX        R R AAR+DAVGHLTLDL +L  P+  +E GG             AV    A   +   R+    +             G+         AA   G+GA   +RLALQLWWPLL GLA GAGDPRLDCRAAALSTLQDVLKEFGSAPEFS RVWP+LLTRILLPVSR   +TTP +   A P +                   R Q+  +   PSALPSP SG  RL              P+A        APGPAS GV PLDVDSWVHTTAPQLFRAAV+VV+SNA+ A PLGVPTLLAFFEPH+CCR             S G  SR  S+SSN        R+ G+  A             +G   GSGD G+     E        A                       AVAEEAGV GDGLMSR+ALES+GLLVEGLAG  ++  PA VLAH+C  L+ ML  CLP+SFG  G
Sbjct: 1453 KTVLTVLRSAAADTQEEVVQPACLILEGLAGETFPLVQYDFVDLVYTLLEMAASRFLDVSLVCIGHLRLCARQLAEGGVDVALQRPLPEATISNTGQLPPEVLGAVRADYGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSRRAARNDAVGHLTLDLDSLDPPVPPDEAGGAVADPPAAXXXXVAVPTPTATGEDRAGRVSPSSDMWPSSAR------GKRGSNGVGGVAAAEGGVGAAEQSRLALQLWWPLLTGLARGAGDPRLDCRAAALSTLQDVLKEFGSAPEFSLRVWPYLLTRILLPVSRLAEKTTPPL---AAPTAXXXXXXXXXXXXXXXXXXXRRQAQPATATPSALPSPGSGHLRLGPSSSLSAASGGRVPVARAAAATAAAPGPASRGVLPLDVDSWVHTTAPQLFRAAVAVVSSNAEAAVPLGVPTLLAFFEPHVCCRRHRHST-------SNGSSSRFCSVSSNS-------RQLGTGVAV------------NGGREGSGDEGESLARQEQRHQVQEDAXXXXXXXXXXXXXXXXXXXXXXXAVAEEAGVPGDGLMSRLALESLGLLVEGLAGHQQEKLPAAVLAHVCDSLLRMLRRCLPESFGRAG 2043          
BLAST of mRNA_L-elsbetiae_contig5343.13523.1 vs. uniprot
Match: A0A6H5KJ76_9PHAE (DUF1981 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ76_9PHAE)

HSP 1 Score: 449 bits (1156), Expect = 5.480e-140
Identity = 334/614 (54.40%), Postives = 371/614 (60.42%), Query Frame = 0
Query:    1 RTVLVNASSQPXXXXXXVVQPACLILERLAGETFPLVQYDFVDLVYTLLEMAASRFLDVSLVCIGHLRLCARHLAEGDVDVALQ---RPLPEVTVSNTGQLPPEVLNAVRADHGGGXXXXXXXXXXXXXXXXXXXXXXXGSTGREREAARSDAVGHLTLDLATLGSPILGEEGGEXXXXXXRPGTAAAVDAGAAATRESGHRIGRQEEXXXXXXXXXXXKAGRISLTSAAATAATGWGIGAVRHTRLALQLWWPLLAGLAGGAGDPRLDCRAAALSTLQDVLKEFGSAPEFSPRVWPFLLTRILLPVSRHVVRTTPSVPPPALPPSLLGSNAPPPSTPSRHSRHRRAQSALSMTAPSALPSPRSGPFRL--------------PLASVGVGDTEAPGPASAGVFPLDVDSWVHTTAPQLFRAAVSVVASNAQTAAPLGVPTLLAFFEPHICCRXXXXXXHDGEIGESGGGRSRAGSLSSNLSCPRADRREAGSTAAAAKKESERQTGPDDGRGPGSGDNGDPGRYPEGEVGAAVAAGAAVAEEAGVSGDGLMSRMALESVGLLVEGLAG-QNKQASPAVLAHLCGCLVHMLDCCLPDSFGLEGRAAVHGANGDE 596
            +TVL    S        VVQPACLILE LAGETFPLVQYDFVDLVYTLLEMAASRFLDVSLVCIGHLRLCAR LAEG VDVALQ   RPLPE T+SNTGQLPPEVL AVRAD G  XXXXXXXXXXXXXXXXXXXXXXX    R R AAR+DAVGHL LDL +L  P+  E GG        P  AAAV A    T     + GR              K G   +       A G G+ A   +RLALQLWWPLL GLA GAGDPRLDCRAAALSTLQDVLKEFGSA EFS RVWP+LLTRILLPVSR   +TTP +  P +P +                   R Q+  +  A SALPSP SG  RL              P+A        APGPAS GV PLDV SWVHTTAPQLFRAAV+V++SNA+ A PLGVPTLLAFFEPH+CCR       +G  G      S +  L +  +     R  +G       ++ +R  G +D                             VAEEAGV GDGLMSR+ALES+GLLVEGLAG Q +Q   AVLAHLC  L+ ML  CL +SFG  GR   H + G E
Sbjct:  113 KTVLTVLRSAAADTQEEVVQPACLILEELAGETFPLVQYDFVDLVYTLLEMAASRFLDVSLVCIGHLRLCARQLAEGGVDVALQPNKRPLPETTISNTGQLPPEVLGAVRADRGXXXXXXXXXXXXXXXXXXXXXXXXXXR--RFRRAARNDAVGHLALDLDSLDPPVPDEAGGSVADP---PAVAAAV-AVPTPTATGEDKAGRVSPSSDMWPSSAHGKRGSNGVGGV--VTAEG-GVVAAEQSRLALQLWWPLLTGLARGAGDPRLDCRAAALSTLQDVLKEFGSASEFSLRVWPYLLTRILLPVSRLAEKTTPPLAAPMVPATXXXXXX---XXXXXXXXXXRLQAQPATAASSALPSPGSGHLRLGPSSSLSAASGGRVPVARTAAAVAAAPGPASRGVLPLDVGSWVHTTAPQLFRAAVAVISSNAEAAVPLGVPTLLAFFEPHVCCRRHRHSTSNGRSGRFYSVSSNSRQLGTGDTV-NGGREGSGGEGERVARQEQRHQGQEDAXXXXXXXX----XXXXXXXXXXXXXXXXVAEEAGVPGDGLMSRLALESLGLLVEGLAGHQQEQIPAAVLAHLCDSLLRMLRRCLSESFGRAGRVG-HDSGGGE 708          
BLAST of mRNA_L-elsbetiae_contig5343.13523.1 vs. uniprot
Match: A0A835ZB96_9STRA (SEC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB96_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.340e-10
Identity = 65/203 (32.02%), Postives = 85/203 (41.87%), Query Frame = 0
Query:  237 GAVRHTRLALQLWWPLLAGLAGGAGDPRLDCRAAALSTLQDVLKEFGSAPEFSPRVWPFLLTRILLPVSRHV---VRTTPSVPPPALPPSLLGSNAPPPSTPSRHSRHRRAQSALSMTAPSALPSPRSGPFRLPLASVGVGDTEAPGPASAGVFPLDVDSWVHTTAPQLFRAAVSVVASNAQTAAPLG--VPTLLAFFEPHIC 434
            GA R  RLAL  WWPLL GL+   GD RLD R+AA+STL+D+L+++G+ PEF    W  +   +L    RH    +  TPS          LGS                   AL                                P     FPL +DSW+ TT PQ+F++ V V   N + A P    +P LL F   + C
Sbjct:  741 GASRRARLAL--WWPLLTGLSECQGDSRLDQRSAAISTLRDLLRDYGALPEFDV-AWGAVFRCVLFAPMRHAAGDLTVTPS----------LGS-------------------AL--------------------------------PTQGNDFPLHMDSWIATTVPQVFQSVVDVYVKNVR-APPCAACLPDLLEFLGYYAC 878          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5343.13523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFA1_ECTSI1.730e-14254.47BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax... [more]
A0A6H5KJ76_9PHAE5.480e-14054.40DUF1981 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZB96_9STRA3.340e-1032.02SEC7 domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..222
NoneNo IPR availablePANTHERPTHR10663GUANYL-NUCLEOTIDE EXCHANGE FACTORcoord: 215..309
NoneNo IPR availablePANTHERPTHR10663:SF357coord: 215..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5343contigL-elsbetiae_contig5343:386..3887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5343.13523.1mRNA_L-elsbetiae_contig5343.13523.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5343 386..3889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5343.13523.1 ID=prot_L-elsbetiae_contig5343.13523.1|Name=mRNA_L-elsbetiae_contig5343.13523.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=644bp
RTVLVNASSQPPPPKKKVVQPACLILERLAGETFPLVQYDFVDLVYTLLE
MAASRFLDVSLVCIGHLRLCARHLAEGDVDVALQRPLPEVTVSNTGQLPP
EVLNAVRADHGGGSGSSSGSGSGSGSGSGSDREDEDGSTGREREAARSDA
VGHLTLDLATLGSPILGEEGGEEEGGEKRPGTAAAVDAGAAATRESGHRI
GRQEEEEEEEEEENENKAGRISLTSAAATAATGWGIGAVRHTRLALQLWW
PLLAGLAGGAGDPRLDCRAAALSTLQDVLKEFGSAPEFSPRVWPFLLTRI
LLPVSRHVVRTTPSVPPPALPPSLLGSNAPPPSTPSRHSRHRRAQSALSM
TAPSALPSPRSGPFRLPLASVGVGDTEAPGPASAGVFPLDVDSWVHTTAP
QLFRAAVSVVASNAQTAAPLGVPTLLAFFEPHICCRRRRRRRHDGEIGES
GGGRSRAGSLSSNLSCPRADRREAGSTAAAAKKESERQTGPDDGRGPGSG
DNGDPGRYPEGEVGAAVAAGAAVAEEAGVSGDGLMSRMALESVGLLVEGL
AGQNKQASPAVLAHLCGCLVHMLDCCLPDSFGLEGRAAVHGANGDEHAAG
AGVDGTGGSGAASPGGGSVRVLFDGGGGGGDAAAGRQDAAGKAS
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