prot_L-elsbetiae_contig534.13513.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig534.13513.1
Unique Nameprot_L-elsbetiae_contig534.13513.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length826
Homology
BLAST of mRNA_L-elsbetiae_contig534.13513.1 vs. uniprot
Match: D7FQL0_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQL0_ECTSI)

HSP 1 Score: 712 bits (1838), Expect = 2.760e-244
Identity = 451/806 (55.96%), Postives = 511/806 (63.40%), Query Frame = 0
Query:    2 ATIVEERERRAGAVDNALSAAPMHASSALLSSLGQHPSSPLSLELISTGSPGRESAISDY----SPKRTFAPSDVLSPEPLVNFRSKTNDGSYTPSSQHFHHSSTAVHEPRARCGCRGLTVRVDYGPLGLSLEASYRIKQGFVLKQTWSDCAVDKGLFAHSVHVQNLPGKRGDDHVSALDLGLEGRSSSSGLIKVRTVGLDSGAVTMASASNTNVNALAGPPLPLRPGITSTKEVGRSVLDGVLEVEEGDILVRVDDVQVTKKSFADVVRLLNEAKRPTRLAFVRHACGRRFVGREKG-GGGGYCGSTAAATRQHSPSRTTPGGSWVGGRRKWRKSGCGCEQPSRAASIGPPVPRSLSPQKSNTRYRQIEAEADGCPVAVLLRARRQLRSGGIGQWHEVVASRGRLWQRLLGTLSPDSHSDRAKLRKLTGSLRSLEEHAVPGTRITGIAKRKLMSNYQRLARNRKSARNSNGCADGDGGKASRALAASVWKDVNRTMSPRRPGGRPGFFSASHLGGGGFVCPAHFAGGSKHAVFRVAYATASTVQFVSGMSYMAALMLVREPEESMAYATLVTLLQERVMQALFPLGDVDLLDAYHLCGGRVVTFRASGASRGPASCEATA----GGGAY--HGRGYRCTERGGIPVDGDGVDSSGDNVDANVHDGGDADRAGGREVCGREEEPTQQVVIGEMLPRLVRAFGKALRRRLPDLHKHLCKQAIPMSFLCAEWFTTAYARSTPLPLALCALDLFLVRLDDVMLRIGLAILEVLAPSLKNMNGFEILLQYGGLTANVCFEEVLRCMLATQ 796
            ATI+ ER +     D AL AAP+HASS LLS  G  P  P S E     S      I D+    SP+   +    LSP+P+  FRS+ ++  YT SSQH H SSTA+HEPRARCGCRGLTVR+D GPLGLSLEASYR+ +  VLKQ WSDCA D G+FAHS+ V N PGK  DD V  LDLGL+GRSSSSGLIKVR VGL+    T      T V+   G  L    G  S     R  + GVLE++EGDILVRVD+VQVTKKSF +V  LL++A+RPTRL FVRHACGRRFVGR+ G GGGG C     A R   P R    G W G      KSGCG +QP  A+ +G  V  S SP+        IE EADGCPVAV+LRARRQLRSGG+ QWHE+VASRG LWQRLL  LSPDSHSDR+                                                                                           GGGG VCPAHFAGG+KHAVFRVA+ATAST+QFVSG+SYMAAL+LV+EP E+MAYATLVTLLQERVMQALFPLGDVDLLDAYHLCGGRVVTFRA GA+R P   E  A    G G Y   G+G+R    G          S  ++    + D G ADRA G ++   EEE    VV+GEMLPRLVR FGKAL+RRLP LH HLCK+AIPMSFLCAEWFTTAYAR+TPLPLALCALDLFLVRLDDVM+R+GLAILEVLAPSLK +NG EILLQYG LTANV F+EVLRC LATQ
Sbjct:  113 ATIMVERGQHGDDGDIALVAAPVHASSPLLSLPG--PPGPRSREQAGKASSSSTVMIRDHTFSVSPQARDSAPLSLSPQPVAVFRSRNSN--YTRSSQHKH-SSTAIHEPRARCGCRGLTVRIDSGPLGLSLEASYRVGETIVLKQAWSDCAADSGMFAHSMLVSNFPGKVDDDQVRVLDLGLDGRSSSSGLIKVRAVGLERNHAT------TTVHTRQGSMLN---GAPSPPNESRGSVVGVLELDEGDILVRVDNVQVTKKSFTEVASLLDQAERPTRLTFVRHACGRRFVGRDNGYGGGGTC---RGAARHKPPCRVAYCGGWDGCCGMMGKSGCGGKQPPNASCVGRVV-SSPSPK--------IETEADGCPVAVILRARRQLRSGGMEQWHELVASRGHLWQRLLRNLSPDSHSDRS-------------------------------------------------------------------------------------------GGGGHVCPAHFAGGAKHAVFRVAFATASTLQFVSGISYMAALVLVQEPLEAMAYATLVTLLQERVMQALFPLGDVDLLDAYHLCGGRVVTFRAFGAARSPTPSEPAARGKSGDGQYPFRGQGHRRMAEGDTRSKVVSAGSPREDKATTIRDTGGADRACGWQMGELEEE----VVVGEMLPRLVRIFGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNGLEILLQYGNLTANVSFQEVLRCALATQ 797          
BLAST of mRNA_L-elsbetiae_contig534.13513.1 vs. uniprot
Match: A0A6H5L6Q0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q0_9PHAE)

HSP 1 Score: 694 bits (1792), Expect = 1.360e-237
Identity = 457/811 (56.35%), Postives = 522/811 (64.36%), Query Frame = 0
Query:    2 ATIVEERERRAGAV-DNALSAAPMHASSALLSSLGQHPSSPLSLE-----LISTGSPGRESAISDYSPKRTFAPSDVLSPEPLVNFRSKTNDGSYTPSSQHFHHSSTAVHEPRARCGCRGLTVRVDYGPLGLSLEASYRIKQGFVLKQTWSDCAVDKGLFAHSVHVQNLPGKRGDDHVSALDLGLEGRSSSSGLIKVRTVGLDSGAVTMASASNTNVNALAGPPLPLRPGITSTKEVGRSVLDGVLEVEEGDILVRVDDVQVTKKSFADVVRLLNEAKRPTRLAFVRHACGRRFVGREKGGGGGYCGSTAAATRQHSPSRTTPGGSWVGGRRKWRKSGCGCEQPSRAASIGPPVPRSLSPQKSNTRYRQIEAEADGCPVAVLLRARRQLRSGGIGQWHEVVASRGRLWQRLLGTLSPDSHSDRAKLRKLTGSLRSLEEHAVPGTRITGIAKRKLMSNYQRLARNRKSAR---NSNGCADGDGGKASRALAASVWKDVNRTMSPRRPGGRPGFFSASHLGGGGFVCPAHFAGGSKHAVFRVAYATASTVQFVSGMSYMAALMLVREPEESMAYATLVTLLQERVMQALFPLGDVDLLDAYHLCGGRVVTFRASGASRGPASCEATAGGGAYHGRGYRCTERGGIPV-DGDG---VDSSGD---NVDANVHDGGDADRAGGREVCGREEEPTQQVVIGEMLPRLVRAFGKALRRRLPDLHKHLCKQAIPMSFLCAEWFTTAYARSTPLPLALCALDLFLVRLDDVMLRIGLAILEVLAPSLKNMNGFEILLQYGGLTANVCFEEVLRCMLATQ 796
            ATI+ ER +  G   D AL AAP+HASS LLS  G  P SP S +     L S+    R+  +S  S  R  AP    SP+P+  FRS+ ++  YTP+SQ  HHSSTA+HEPRARCGCRGLTVRVD GPLGLSLEASYR+ +  VLKQ WSDCA D G+FAHS+ V N+PGK  DD    LD  L+GR SSSGLIKVR VGL+    TM   +    N L G P P       ++  GR V  GVLE++EGDILVRVD+VQ                                                                                  P  A+ +G  V  S SP+        IE EADGCPVAV+LRARRQLRSGG+ QW+E VASR RLWQRLL  LSPDSHSDRAKLRKL    RS + HA     + G+ K KL +NYQRL  +RK  R   N++GC      KA RALAA VWKDVNRTMSPRR G RPGFFSAS LGGGG VCPAHFAGGSKHAVFRVA+ATAST+QFVSGMSYMAAL+LV+EP E+MAYATLVTLLQ     ALFPLGDVDLLDAYHLCGGRVVTFRA GA+R P   EA A G +  G+ Y    +G + + +GD    V S+G    +    + D   ADRA G E+   EEE    VV+ EMLPRLVR FGKAL+RRLP LH HLCK+A+PMSFLCAEWFTTAYAR+TPLPLALCALDLFLVRLDDVM+R+GLAILEVLAPSLK +NG EILLQYG LTANV F+EVLRC LATQ
Sbjct:  112 ATIMAERGQHHGDDGDIALVAAPVHASSPLLSLPG--PPSPRSRKQAGKVLGSSAVMNRDHTLSVSSQARDPAPLSP-SPQPVAVFRSRNSN--YTPTSQPNHHSSTAIHEPRARCGCRGLTVRVDSGPLGLSLEASYRVGETLVLKQAWSDCAADSGMFAHSMLVSNVPGKVDDDQARVLDPWLDGRLSSSGLIKVRAVGLERDHATMTVRTRQG-NILNGAPSP------PSESRGRVV--GVLELDEGDILVRVDNVQ----------------------------------------------------------------------------------PPNASCVGRLV-SSPSPK--------IETEADGCPVAVILRARRQLRSGGMEQWYEAVASRRRLWQRLLRNLSPDSHSDRAKLRKLVVCSRSADGHA-----LKGLVKCKLRNNYQRLISSRKGLRKSSNTDGC-----NKAKRALAAKVWKDVNRTMSPRRHGARPGFFSASQLGGGGHVCPAHFAGGSKHAVFRVAFATASTLQFVSGMSYMAALVLVQEPVEAMAYATLVTLLQ-----ALFPLGDVDLLDAYHLCGGRVVTFRAFGAARSPTPSEAAARGESGDGQ-YPFPGQGHLRMAEGDTRSKVVSAGSLRKDKATTIRDTDGADRACGWEIGELEEE----VVVDEMLPRLVRIFGKALKRRLPALHGHLCKEAVPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKTLNGLEILLQYGNLTANVSFQEVLRCALATQ 797          
BLAST of mRNA_L-elsbetiae_contig534.13513.1 vs. uniprot
Match: A0A421EX14_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EX14_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 6.600e-9
Identity = 42/107 (39.25%), Postives = 56/107 (52.34%), Query Frame = 0
Query:  691 FGKALRRRLPDLHKHLCKQAIPMSFLCAEWFTTAYARSTPLPLALCALDLFLVRLDDVMLRIGLAILEVLAPSLKNMNGFEILLQYGGLTANVCFEEVLRCMLATQP 797
            F +   R LP LH HL  Q   +     EWFTT ++ ST   LA    DLF V L DV LR+GLAIL++L   L  M+  + L ++  L   +   +V+   LA QP
Sbjct:   49 FEQMFIRDLPKLHAHLMVQGFAVPMYGIEWFTTLFSLSTKTDLACAIFDLFFVGLQDVFLRVGLAILKLLEAKLMCMSFEDFLREFKPLVRELDPYQVILQALALQP 155          
BLAST of mRNA_L-elsbetiae_contig534.13513.1 vs. uniprot
Match: K3WQH6_GLOUD (Rab-GAP TBC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQH6_GLOUD)

HSP 1 Score: 65.1 bits (157), Expect = 3.610e-7
Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 0
Query:  691 FGKALRRRLPDLHKHLCKQAIPMSFLCAEWFTTAYARSTPLPLALCALDLFLVRLDDVMLRIGLAILEVLAPSLKNMNGFEILLQYGGLTANV 783
            F    +R LPDLH+H+  Q   +     EWFTT ++ ST   LA    DLF V + D+ LR+GLAIL++L   L  M   + L ++  L   +
Sbjct:  185 FNLMFQRELPDLHQHILSQGFVIPMYGIEWFTTLFSLSTKADLACAIFDLFFVGVQDIFLRMGLAILKLLESKLMCMTFEDFLREFKPLVRQI 277          
BLAST of mRNA_L-elsbetiae_contig534.13513.1 vs. uniprot
Match: A0A3F2S3X1_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3X1_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.030e-6
Identity = 36/86 (41.86%), Postives = 47/86 (54.65%), Query Frame = 0
Query:  691 FGKALRRRLPDLHKHLCKQAIPMSFLCAEWFTTAYARSTPLPLALCALDLFLVRLDDVMLRIGLAILEVLAPSLKNMNGFEILLQY 776
            F +   R LP LH HL  Q   +     EWFTT ++ ST   LA    DLF V L DV LR+GLAIL++L   L  M+  + L ++
Sbjct:  185 FEQMFIRDLPKLHAHLMVQGFTVPMYGIEWFTTLFSLSTKTDLACAIFDLFFVGLQDVFLRVGLAILKLLEAKLMCMSFEDFLREF 270          
BLAST of mRNA_L-elsbetiae_contig534.13513.1 vs. uniprot
Match: A0A662WPF7_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPF7_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.090e-6
Identity = 39/110 (35.45%), Postives = 55/110 (50.00%), Query Frame = 0
Query:  691 FGKALRRRLPDLHKHLCKQAIPMSFLCAEWFTTAYARSTPLPLALCALDLFLVRLDDVMLRIGLAILEVLAPSLKNMNGFEILLQYGGLTANVCFEEVLRCMLATQPRQD 800
            F    RR LP LH HL  Q   +     EWFTT ++ ST   LA    DLF V + D+ LR+GLAIL++L   L  M   + L ++  L   +   +V+   L  +P  +
Sbjct:  202 FEVMFRRDLPKLHAHLLAQGFALPMYGIEWFTTLFSLSTKTDLACAIFDLFFVGVQDIFLRVGLAILKLLEAKLMCMTCEDFLREFKLLVRELDPYQVILQALVLRPNPE 311          
BLAST of mRNA_L-elsbetiae_contig534.13513.1 vs. uniprot
Match: A0A5D6XX98_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX98_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.280e-6
Identity = 35/93 (37.63%), Postives = 49/93 (52.69%), Query Frame = 0
Query:  691 FGKALRRRLPDLHKHLCKQAIPMSFLCAEWFTTAYARSTPLPLALCALDLFLVRLDDVMLRIGLAILEVLAPSLKNMNGFEILLQYGGLTANV 783
            F    +R LPDLH+HL  Q   +     EWFTT ++ ST   LA    DLF V + D+ LR+GLAIL++    L  M   + L ++  L   +
Sbjct:  262 FNLMFQRELPDLHQHLLAQGFVIPMYGIEWFTTLFSLSTKPDLACAIFDLFFVGVQDIFLRMGLAILKLSEAKLMCMTFEDFLKEFKPLVRQI 354          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig534.13513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FQL0_ECTSI2.760e-24455.96Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5L6Q0_9PHAE1.360e-23756.35Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A421EX14_9STRA6.600e-939.25Rab-GAP TBC domain-containing protein n=2 Tax=Phyt... [more]
K3WQH6_GLOUD3.610e-737.63Rab-GAP TBC domain-containing protein n=1 Tax=Glob... [more]
A0A3F2S3X1_9STRA1.030e-641.86Rab-GAP TBC domain-containing protein n=1 Tax=Phyt... [more]
A0A662WPF7_9STRA1.090e-635.45Rab-GAP TBC domain-containing protein n=2 Tax=Noth... [more]
A0A5D6XX98_9STRA3.280e-637.63Rab-GAP TBC domain-containing protein n=1 Tax=Pyth... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 446..466
NoneNo IPR availableGENE3D1.10.472.80coord: 678..807
e-value: 6.3E-20
score: 73.4
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 392..768
e-value: 5.4E-5
score: 22.3
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 684..762
e-value: 1.7E-10
score: 41.0
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 393..745
score: 13.472
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 684..775

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig534contigL-elsbetiae_contig534:11617..18679 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig534.13513.1mRNA_L-elsbetiae_contig534.13513.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig534 11550..18970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig534.13513.1 ID=prot_L-elsbetiae_contig534.13513.1|Name=mRNA_L-elsbetiae_contig534.13513.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=826bp
MATIVEERERRAGAVDNALSAAPMHASSALLSSLGQHPSSPLSLELISTG
SPGRESAISDYSPKRTFAPSDVLSPEPLVNFRSKTNDGSYTPSSQHFHHS
STAVHEPRARCGCRGLTVRVDYGPLGLSLEASYRIKQGFVLKQTWSDCAV
DKGLFAHSVHVQNLPGKRGDDHVSALDLGLEGRSSSSGLIKVRTVGLDSG
AVTMASASNTNVNALAGPPLPLRPGITSTKEVGRSVLDGVLEVEEGDILV
RVDDVQVTKKSFADVVRLLNEAKRPTRLAFVRHACGRRFVGREKGGGGGY
CGSTAAATRQHSPSRTTPGGSWVGGRRKWRKSGCGCEQPSRAASIGPPVP
RSLSPQKSNTRYRQIEAEADGCPVAVLLRARRQLRSGGIGQWHEVVASRG
RLWQRLLGTLSPDSHSDRAKLRKLTGSLRSLEEHAVPGTRITGIAKRKLM
SNYQRLARNRKSARNSNGCADGDGGKASRALAASVWKDVNRTMSPRRPGG
RPGFFSASHLGGGGFVCPAHFAGGSKHAVFRVAYATASTVQFVSGMSYMA
ALMLVREPEESMAYATLVTLLQERVMQALFPLGDVDLLDAYHLCGGRVVT
FRASGASRGPASCEATAGGGAYHGRGYRCTERGGIPVDGDGVDSSGDNVD
ANVHDGGDADRAGGREVCGREEEPTQQVVIGEMLPRLVRAFGKALRRRLP
DLHKHLCKQAIPMSFLCAEWFTTAYARSTPLPLALCALDLFLVRLDDVML
RIGLAILEVLAPSLKNMNGFEILLQYGGLTANVCFEEVLRCMLATQPRQD
PLAQRPTGKNPLGSDKRSTAPCAVS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf