prot_L-elsbetiae_contig5253.13377.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5253.13377.1
Unique Nameprot_L-elsbetiae_contig5253.13377.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length172
Homology
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BLAST of mRNA_L-elsbetiae_contig5253.13377.1 vs. uniprot
Match: A0A6H5JKQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ9_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 9.780e-20
Identity = 62/157 (39.49%), Postives = 67/157 (42.68%), Query Frame = 0 
Query:   15 AGWEQTVALDMDRAKAVFSAVAHLHASFWPSPTAVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGRRYARGLHEQGTFWNLEKRNPEDLEELEQEYENLLRRFRPLLPAPWFEESSQQPAGGD 171
            A WEQ  ALD  RAKAV SA AHLHASFWP P                                                                    RYARGLH+QGTFW+LEKR+  DL  LE+EY  L+R FRPLLPA WFE   Q   GGD
Sbjct:  216 ADWEQVGALDPGRAKAVLSAAAHLHASFWPEPPPAAGGWEPRGHCQPQSPQRQEDHGREQQRHPDLGSGHHHCDGEW-----------------------RYARGLHKQGTFWSLEKRDAGDLAGLEEEYRKLMRNFRPLLPAAWFEAPQQ---GGD 346
[Close]
BLAST of mRNA_L-elsbetiae_contig5253.13377.1 vs. uniprot
Match: D8LDB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB8_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 5.000e-19
Identity = 61/150 (40.67%), Postives = 67/150 (44.67%), Query Frame = 0 
Query:   22 ALDMDRAKAVFSAVAHLHASFWPSPTAVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGRRYARGLHEQGTFWNLEKRNPEDLEELEQEYENLLRRFRPLLPAPWFEESSQQPAGGD 171
            ALD+ RAKAV SA AHLHASFWP P A  A                                                             G RYARGLH+QGTFW+LEKR+  DL  LE+EY+ LL  FRPLLPA WFE   Q   GGD
Sbjct:   92 ALDLGRAKAVLSAAAHLHASFWPEPPAAAAGWEPRRHSQPQSPKRQEDHGREQQRHPDLGPGHHHCDG-----------------------GGRYARGLHKQGTFWSLEKRDAGDLAGLEEEYQKLLGNFRPLLPAAWFESPHQ---GGD 215
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5253.13377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKQ9_9PHAE9.780e-2039.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDB8_ECTSI5.000e-1940.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5253contigL-elsbetiae_contig5253:11399..12344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5253.13377.1mRNA_L-elsbetiae_contig5253.13377.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5253 11399..12344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5253.13377.1 ID=prot_L-elsbetiae_contig5253.13377.1|Name=mRNA_L-elsbetiae_contig5253.13377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
MFFSCLFGSPEDLGAGWEQTVALDMDRAKAVFSAVAHLHASFWPSPTAVT
AAASPPPPPAAAEVAADEGGKQKQQLDDPNLNSSGNSEAAAVPAAALAAA
AGGGGEGGGGREGRRYARGLHEQGTFWNLEKRNPEDLEELEQEYENLLRR
FRPLLPAPWFEESSQQPAGGDG
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