prot_L-elsbetiae_contig5233.13344.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5233.13344.1
Unique Nameprot_L-elsbetiae_contig5233.13344.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length105
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5233.13344.1 vs. uniprot
Match: D7FQH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH8_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 8.410e-22
Identity = 67/84 (79.76%), Postives = 72/84 (85.71%), Query Frame = 0 
Query:    1 GYHKGRNDLASLAAVEGRIAADDTGGLIGKXXXXXXXXXXXXXXXXXXXLRIGRDAKDTDVLKRFSSKLEDALGKNDETRRDRG 84
            GY +GR++LASLAA EGRI+ADDTGGL+GK XXXXXXXXXXX       LRIGRDA DTDVLKRFSSKLEDALGKNDETRR RG
Sbjct:  249 GYQQGRDELASLAAGEGRISADDTGGLLGKVXXXXXXXXXXXR------LRIGRDANDTDVLKRFSSKLEDALGKNDETRRHRG 326
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5233.13344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQH8_ECTSI8.410e-2279.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 62..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5233contigL-elsbetiae_contig5233:3597..5112 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5233.13344.1mRNA_L-elsbetiae_contig5233.13344.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5233 3596..5112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5233.13344.1 ID=prot_L-elsbetiae_contig5233.13344.1|Name=mRNA_L-elsbetiae_contig5233.13344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp
GYHKGRNDLASLAAVEGRIAADDTGGLIGKVGKDGGGGGGGSRGGRGGRL
RIGRDAKDTDVLKRFSSKLEDALGKNDETRRDRGGGGGRDGRDGRDRERD
SYRGA
back to top