prot_L-elsbetiae_contig5225.13332.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5225.13332.1
Unique Nameprot_L-elsbetiae_contig5225.13332.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length159
Homology
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: D7G8F2_ECTSI (Decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F2_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 2.870e-52
Identity = 100/155 (64.52%), Postives = 113/155 (72.90%), Query Frame = 0
Query:    8 ELVVILVACVIG-PSACFL----HGSTSRTDKRAVTRGLGASCCPRATQQSTDVEHVEHRPKDLDQDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAPSRLVDVLLGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            EL+ +L+ C +  PS+ FL      + +     AV  G G    P A Q+   +         L+QD TPLVDALAEAAGNVR PLF+PGHKMGSGAPSRLVD++LGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGA KTWMLANG
Sbjct:    5 ELICVLMVCALACPSSSFLLDCIRTANTAPAVTAVFLGRGRRPRPTAVQRVRCLRTQTRASAGLNQDSTPLVDALAEAAGNVRSPLFFPGHKMGSGAPSRLVDLILGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAAKTWMLANG 159          
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: A0A835Z373_9STRA (Decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z373_9STRA)

HSP 1 Score: 145 bits (366), Expect = 6.630e-38
Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 0
Query:   67 DQDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAPSRLVDVLLGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            DQ+ TP+VDALAEAA  +R PLF+PGHKMG GAP+ LVD LLGG + ALRHDLPELPELDNLF P GPIRDAE LAA AFGA +TW LANG
Sbjct:   29 DQNSTPIVDALAEAAAKIRAPLFFPGHKMGRGAPAPLVDKLLGGSIAALRHDLPELPELDNLFCPSGPIRDAESLAAAAFGASRTWFLANG 119          
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: A0A6H5K8P0_9PHAE (ADC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P0_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 7.040e-31
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0
Query:   95 MGSGAPSRLVDVLLGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            MGSGAPSRLVD++LGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGA KTWMLANG
Sbjct:    1 MGSGAPSRLVDLILGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAAKTWMLANG 63          
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: R1E9U9_EMIHU (OKR_DC_1 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E9U9_EMIHU)

HSP 1 Score: 108 bits (270), Expect = 1.020e-27
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0
Query:   66 LDQDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAPSRLVDVLLGG---KLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            L Q  TPL+DA+  A+ +VR P F+PGHKMG GAP+ L + +LGG   +   LR DLPELPELDNLF+ EGPI +A+ LA++AFGA  T  L NG
Sbjct:    2 LSQSDTPLIDAIQRASQSVRAPFFFPGHKMGEGAPAPLREAVLGGAAGRTAPLRSDLPELPELDNLFSAEGPIHEAQQLASEAFGARSTHFLING 96          
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: A0A7S4BJJ9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJJ9_CHRCT)

HSP 1 Score: 116 bits (290), Expect = 2.820e-27
Identity = 57/92 (61.96%), Postives = 67/92 (72.83%), Query Frame = 0
Query:   66 LDQDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAPSRLVDVLLGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            L Q   PL++AL  A+  V+ P F+PGHKMG GAP  L   LL G + ALRHDLPELPELDNLFAPEG I DA+ LAA+AFGA ++W L NG
Sbjct:    2 LVQSRAPLIEALVMASAAVKAPFFFPGHKMGEGAPLVLRRDLLKGDMSALRHDLPELPELDNLFAPEGAIADAQRLAAEAFGAKRSWFLVNG 93          
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: A0A7S3S7V0_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S7V0_EMIHU)

HSP 1 Score: 108 bits (270), Expect = 1.330e-26
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0
Query:   66 LDQDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAPSRLVDVLLGG---KLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            L Q  TPL+DA+  A+ +VR P F+PGHKMG GAP+ L + +LGG   +   LR DLPELPELDNLF+ EGPI +A+ LA++AFGA  T  L NG
Sbjct:   83 LSQSDTPLIDAIQRASQSVRAPFFFPGHKMGEGAPAPLREAVLGGAAGRTAPLRSDLPELPELDNLFSAEGPIHEAQQLASEAFGARSTHFLING 177          
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: R1FJ35_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FJ35_EMIHU)

HSP 1 Score: 108 bits (270), Expect = 4.870e-25
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0
Query:   66 LDQDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAPSRLVDVLLGG---KLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            L Q  TPL+DA+  A+ +VR P F+PGHKMG GAP+ L + +LGG   +   LR DLPELPELDNLF+ EGPI +A+ LA++AFGA  T  L NG
Sbjct:    2 LSQSDTPLIDAIQRASQSVRAPFFFPGHKMGEGAPAPLREAVLGGAAGRTAPLRSDLPELPELDNLFSAEGPIHEAQQLASEAFGARSTHFLING 96          
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: UPI0016894D20 (aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI0016894D20)

HSP 1 Score: 103 bits (257), Expect = 6.780e-23
Identity = 55/95 (57.89%), Postives = 62/95 (65.26%), Query Frame = 0
Query:   63 PKDLDQDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAPSRLVDVLLGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            PKD  Q  TPL+DAL + AG    P + PGHK G G P RL D L    L   + DLPELPELDNLFAPEG I +A+ LAA AFGA +TW L NG
Sbjct:    2 PKDS-QATTPLLDALQKCAGKPDAPFYAPGHKRGQGTPQRLADFL---GLPVFQADLPELPELDNLFAPEGAIAEAQQLAAAAFGAAQTWFLVNG 92          
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: A0A6P0T479_9CYAN (Lysine decarboxylase (Fragment) n=1 Tax=Moorena sp. SIO2I5 TaxID=2607825 RepID=A0A6P0T479_9CYAN)

HSP 1 Score: 97.4 bits (241), Expect = 8.650e-23
Identity = 52/90 (57.78%), Postives = 59/90 (65.56%), Query Frame = 0
Query:   68 QDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAPSRLVDVLLGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            Q+ TPL+DAL  +A       + PGHK G G P  L D+L  GK    R DLPELPELDNLFAPEG I +A+ LAA AFGA KTW L NG
Sbjct:    8 QEKTPLLDALRASAQKPHAAFYAPGHKQGKGIPEPLADLL--GK-SVFRADLPELPELDNLFAPEGVIEEAQDLAAAAFGASKTWFLVNG 94          
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Match: A0A1Y1HZP2_KLENI (Orn/Lys/Arg decarboxylase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZP2_KLENI)

HSP 1 Score: 102 bits (255), Expect = 2.060e-22
Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 0
Query:   54 TDVEHVEHRPKDLDQDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAPSRLVDVLLGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGKTWMLANG 157
            +DVE+ E     LDQ+ +PL +A+ +AA     P ++PGHK G+GAP+ L D L        RHDLPE+P LDNL +PEGPI DA+ LAA AFGA +TW L NG
Sbjct:  552 SDVENSEP----LDQETSPLWEAVTQAAERSDAPFYFPGHKKGAGAPAELRDALGHA---VFRHDLPEIPGLDNLASPEGPILDAQRLAAAAFGADRTWFLVNG 648          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5225.13332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8F2_ECTSI2.870e-5264.52Decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A835Z373_9STRA6.630e-3875.82Decarboxylase n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A6H5K8P0_9PHAE7.040e-3195.24ADC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
R1E9U9_EMIHU1.020e-2756.84OKR_DC_1 domain-containing protein n=1 Tax=Emilian... [more]
A0A7S4BJJ9_CHRCT2.820e-2761.96Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3S7V0_EMIHU1.330e-2656.84Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
R1FJ35_EMIHU4.870e-2556.84Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
UPI0016894D206.780e-2357.89aminotransferase class I/II-fold pyridoxal phospha... [more]
A0A6P0T479_9CYAN8.650e-2357.78Lysine decarboxylase (Fragment) n=1 Tax=Moorena sp... [more]
A0A1Y1HZP2_KLENI2.060e-2251.92Orn/Lys/Arg decarboxylase n=1 Tax=Klebsormidium ni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000310Orn/Lys/Arg decarboxylase, major domainPFAMPF01276OKR_DC_1coord: 71..157
e-value: 3.3E-9
score: 36.0
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 71..158
e-value: 2.0E-18
score: 68.5
NoneNo IPR availablePANTHERPTHR43277:SF4coord: 51..157
NoneNo IPR availablePANTHERPTHR43277FAMILY NOT NAMEDcoord: 51..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.669
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 71..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5225contigL-elsbetiae_contig5225:4544..8633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5225.13332.1mRNA_L-elsbetiae_contig5225.13332.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5225 4534..8633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5225.13332.1 ID=prot_L-elsbetiae_contig5225.13332.1|Name=mRNA_L-elsbetiae_contig5225.13332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp
MRGCATRELVVILVACVIGPSACFLHGSTSRTDKRAVTRGLGASCCPRAT
QQSTDVEHVEHRPKDLDQDVTPLVDALAEAAGNVRCPLFYPGHKMGSGAP
SRLVDVLLGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAGK
TWMLANGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000310Orn/Lys/Arg_deCO2ase_major_dom
IPR015421PyrdxlP-dep_Trfase_major
IPR015424PyrdxlP-dep_Trfase