prot_L-elsbetiae_contig5225.13330.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5225.13330.1
Unique Nameprot_L-elsbetiae_contig5225.13330.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length395
Homology
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BLAST of mRNA_L-elsbetiae_contig5225.13330.1 vs. uniprot
Match: D7G8F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F3_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 8.540e-52
Identity = 104/183 (56.83%), Postives = 116/183 (63.39%), Query Frame = 0 
Query:  212 MEEALRALNVPLVAVACAESEIPSALACWCGGXXXXXXXXXXXXXXXXXXXXXXXXXAGMVATAEMLPTEGTVEITIMDECYHPRQLLLSERVKDALRGTGALYAVDSSCVYPVNTNGGGAAXXXXXXXXXXXXAAAVLSPEEFRRAQDGCLPAVLADLTPKPRLSLDSRLQNQMFTTGGGKR 394
            ME  LRALNVPLVA++C + EIPSAL CWC G                         A   AT +  P EG+  ITIMDECYHP QL LSE+V+DALRGTGALYAVDSSCVYPVNT+GGG                 VLSPEEFR+ QDGCLPAVLADLT +PRL L  +LQNQ F  GGG+R
Sbjct:    1 MEGTLRALNVPLVAISCVDGEIPSALTCWCRGSRDGGAADNSSESDT----------AATGATTKRSPMEGSAHITIMDECYHPTQLSLSEKVRDALRGTGALYAVDSSCVYPVNTSGGGGTRAGVGAATGG--VTGVLSPEEFRQTQDGCLPAVLADLTIRPRLPLKPQLQNQTFV-GGGER 170
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BLAST of mRNA_L-elsbetiae_contig5225.13330.1 vs. uniprot
Match: A0A6H5K9X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9X8_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.090e-38
Identity = 76/114 (66.67%), Postives = 85/114 (74.56%), Query Frame = 0 
Query:  281 EGTVEITIMDECYHPRQLLLSERVKDALRGTGALYAVDSSCVYPVNTNGGGAAXXXXXXXXXXXXAAAVLSPEEFRRAQDGCLPAVLADLTPKPRLSLDSRLQNQMFTTGGGKR 394
            EG+  ITIMDECYHP QL LSE+ +DALRGTGALYAVDSSCVYPVNT+GGG A               VLSPE+FR+ QDGCLPAVLADLT +PRL L  +LQ QMF  GGG+R
Sbjct:    2 EGSAHITIMDECYHPTQLSLSEKARDALRGTGALYAVDSSCVYPVNTSGGGGARAGVAAAMGS--VTGVLSPEDFRQTQDGCLPAVLADLTMRPRLPLKPQLQKQMFV-GGGER 112
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5225.13330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8F3_ECTSI8.540e-5256.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9X8_9PHAE1.090e-3866.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 102..269
e-value: 5.6E-11
score: 44.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5225contigL-elsbetiae_contig5225:190..3370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5225.13330.1mRNA_L-elsbetiae_contig5225.13330.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5225 190..3370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5225.13330.1 ID=prot_L-elsbetiae_contig5225.13330.1|Name=mRNA_L-elsbetiae_contig5225.13330.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=395bp
ASASSRAQVTSGGGGGGVSIGAASLVSSFLKRGSAASMPSPTGMPHVHAA
SPPKTPTSLASLVAGVPPGSAGAGFRTPTAGTDNGFPRRGGDRFFHSAWP
PSLKKRRRILYYPKPNNPVGRRILYWVRANYRVKDNLGLSVAFWLSAQTQ
LPLQAVTFVDPAIGRSMSSCDTASGSDEKTMRLQGARNAQHGAERHELPF
GMAVEASALCEMEEALRALNVPLVAVACAESEIPSALACWCGGGSSSTPA
AARPPSAGSTVAGAPPAAAGMVATAEMLPTEGTVEITIMDECYHPRQLLL
SERVKDALRGTGALYAVDSSCVYPVNTNGGGAAGGQAGAGASTGGAAAVL
SPEEFRRAQDGCLPAVLADLTPKPRLSLDSRLQNQMFTTGGGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold