prot_L-elsbetiae_contig5215.13321.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5215.13321.1
Unique Nameprot_L-elsbetiae_contig5215.13321.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length226
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5215.13321.1 vs. uniprot
Match: D7G2F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F9_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.140e-74
Identity = 136/199 (68.34%), Postives = 158/199 (79.40%), Query Frame = 0 
Query:    1 QVKAARYALSKDPKGQAKGGTVGARYAAAQLGVPESQSVREWMKRLPEMEEALERAQAVGGDSASLHTRKKKSMSRGRVPSTHKIENQLLAFIEQESSS--YSNGLSRVA-------GLKKVSSRAVKDKAQELMPDVFGVAPSPDDNYGGGGDDYQAALKRHEAKISSWCHRFLKRHRMASLCENP--LKKHKREAEG 188
            +VKAARYALS DPKGQA+GGTVGARYAAAQL +PESQSVREWM+RLPEME  L RAQ  GG+  S H R+KKSMS GRVP+THKIE +LLAFI++ESSS  +SNG+++         G KKVSSRAVKDKAQELMPDVFGV PS + +    GDDY  A KR+EAK+SSWCHRFLKRHR+A+LCENP  +KK +   EG
Sbjct:  269 KVKAARYALSPDPKGQARGGTVGARYAAAQLDIPESQSVREWMRRLPEMEAELMRAQTDGGEKVSRHVRRKKSMSNGRVPATHKIEEELLAFIQRESSSCSFSNGVAQAXXXXXXXXGSKKVSSRAVKDKAQELMPDVFGVVPSWERD----GDDYPVAFKRYEAKMSSWCHRFLKRHRVANLCENPNPIKKKRIGEEG 463
[Close]
BLAST of mRNA_L-elsbetiae_contig5215.13321.1 vs. uniprot
Match: A0A6H5JI20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI20_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 7.690e-72
Identity = 133/190 (70.00%), Postives = 152/190 (80.00%), Query Frame = 0 
Query:    1 QVKAARYALSKDPKGQAKGGTVGARYAAAQLGVPESQSVREWMKRLPEMEEALERAQAVGGDSASLHTRKKKSMSRGRVPSTHKIENQLLAFIEQESSSYSNGLSRVAGLKKVSSRAVKDKAQELMPDVFGVAPSPDDNYGGGGDDYQAALKRHEAKISSWCHRFLKRHRMASLCENP--LKKHKREAEG 188
            +VKAARYALS DPKGQA+GGTVGARYAAAQL +PESQSVREWM+RLPEME  L RAQ  GG+  S H R+KKSMS GRVP+TH IE +LLAFI++ESSS S      +  KKVSSRAVKDKAQELMPDVFGV PS + +    GDDY  A KR+EAK+SSWCHRFLKRHR+A+LCENP  +KK + E EG
Sbjct:  631 KVKAARYALSPDPKGQARGGTVGARYAAAQLDIPESQSVREWMRRLPEMEAELTRAQTDGGEKVSRHVRRKKSMSNGRVPATHMIEEELLAFIQRESSSCSFSNGAASRSKKVSSRAVKDKAQELMPDVFGVVPSWERD----GDDYPVAFKRYEAKMSSWCHRFLKRHRVANLCENPNPIKKKRIEEEG 816
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5215.13321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2F9_ECTSI1.140e-7468.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI20_9PHAE7.690e-7270.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5215contigL-elsbetiae_contig5215:11139..12675 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5215.13321.1mRNA_L-elsbetiae_contig5215.13321.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5215 11139..12675 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5215.13321.1 ID=prot_L-elsbetiae_contig5215.13321.1|Name=mRNA_L-elsbetiae_contig5215.13321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp
QVKAARYALSKDPKGQAKGGTVGARYAAAQLGVPESQSVREWMKRLPEME
EALERAQAVGGDSASLHTRKKKSMSRGRVPSTHKIENQLLAFIEQESSSY
SNGLSRVAGLKKVSSRAVKDKAQELMPDVFGVAPSPDDNYGGGGDDYQAA
LKRHEAKISSWCHRFLKRHRMASLCENPLKKHKREAEGGGGEGGGGGAGG
GGGGGWTGYGGGSSSGGGGGEYEDED
back to top