prot_L-elsbetiae_contig5211.13315.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5211.13315.1
Unique Nameprot_L-elsbetiae_contig5211.13315.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1255
Homology
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BLAST of mRNA_L-elsbetiae_contig5211.13315.1 vs. uniprot
Match: D8LMX4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX4_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 4.690e-38
Identity = 92/145 (63.45%), Postives = 107/145 (73.79%), Query Frame = 0 
Query:    3 WSVRQRFSALDAMRHSLWKNSLPLPADVRFPRKQAPLMHLVNKWQAPWAPAAATAMPTSEMEGRRSGLEVYLSALSGLKESWRSMIVTDVLC-AEQETASATMSPATDQATEDAKRSSAAVPPPIAKAVSWVDQQIPAAALTEVA 146
            W+V+QRFS LDAMRH LWK  LPLP DV FPRKQAPL+  V+KW AP       AMP  EME RR GL+ YLS LSGLK+SWRS +VT+VLC AE +  SA+ SPA +QA E    SS+A+PPP+ KAVSWVDQQ PA ALT+ A
Sbjct:   18 WTVKQRFSTLDAMRHGLWKKRLPLP-DVPFPRKQAPLLMFVHKWHAP----GTLAMPAEEMEERREGLQAYLSELSGLKDSWRSDVVTEVLCLAEDDATSASASPAGNQANEAQPPSSSALPPPVTKAVSWVDQQTPATALTDFA 157
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BLAST of mRNA_L-elsbetiae_contig5211.13315.1 vs. uniprot
Match: A0A6H5KCA3_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA3_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 4.600e-35
Identity = 90/156 (57.69%), Postives = 105/156 (67.31%), Query Frame = 0 
Query:    3 WSVRQRFSALDAMRHSLWKNSLPLPADVRFPRKQAPLMHLVNKWQAPWAPAAATAMPTSEMEGRRSGLEVYLSALSGLKESWRSMIVTDVLC-AEQETASATMSPATDQATEDA-----------KRSSAAVPPPIAKAVSWVDQQIPAAALTEVA 146
            W+V+QRFS LDAMRH LWK  LPLP DV FPRKQAPL+  V+KW AP  PA    MP  EME RR GL+ YLS LSGLK+SWRS +VT+VLC AE +  S + SPA DQ  E++             SS+A PPP+  A SWVDQQ PA ALT+ A
Sbjct:   11 WTVKQRFSTLDAMRHGLWKKRLPLP-DVAFPRKQAPLLMFVHKWHAPGTPA----MPAEEMEERREGLQAYLSELSGLKDSWRSDVVTEVLCLAEDDATSPSASPAADQVQEESFARSCQANEAQTPSSSAPPPPVTNAASWVDQQTPATALTDFA 161
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5211.13315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMX4_ECTSI4.690e-3863.45PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KCA3_9PHAE4.600e-3557.69PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5211contigL-elsbetiae_contig5211:4067..9107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5211.13315.1mRNA_L-elsbetiae_contig5211.13315.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5211 4067..9107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5211.13315.1 ID=prot_L-elsbetiae_contig5211.13315.1|Name=mRNA_L-elsbetiae_contig5211.13315.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1255bp
RTWSVRQRFSALDAMRHSLWKNSLPLPADVRFPRKQAPLMHLVNKWQAPW
APAAATAMPTSEMEGRRSGLEVYLSALSGLKESWRSMIVTDVLCAEQETA
SATMSPATDQATEDAKRSSAAVPPPIAKAVSWVDQQIPAAALTEVAVVVQ
RSTLVSPPPPPPPVSALRSSPSPKRPADEELTASSEDTASASAPATASDS
TAARSVKRSKNVSEDDGQKAAAAAAAAAAAAERVLPEQSPSTPVVVLSDE
PSSDPAPVAADGAPEVEAGAPVAPPVAAALPVVDGEAEGEADGEADGEAD
GEADGEATALCSSPPEAGMCAVVPDVSVADAAAVTPSPTPESQETEQLPL
LIRRLEEREQMWKESALAHAQKASNSTTREGGTATPPAPAASDAIRLVNA
APADALANSEAPAPTSSTAGVNVIGTAVGSGGAPPPSYEWLAPPSEAAAR
ASDKIGIAEHQEVEGDAASVEEEDAPATEVEPPAPVKAEAAPGLTDEGVA
ATRAEEDAAPVPVEQGATSVDVEEDAAPALTDEGMAAVQADEGAAPAPRE
DATPAAAEQDAAAPTPADEDVARALAVVEGAACAHVEKDAAPGLTDKGTA
APQADEGAAPARFEEDAAVPAPAEEDVAPAPAVEEGATSAPVEEDAASGL
ADKATAVPQADEGAAPARLEEDATPAPAEEDAAAPTPANEDVALAPAIEE
GATSAHIEESDPSTPPAGSRDIDEGSVEDNEEGMESERGREGASAVSQLA
LSSATEEGAEEDDGGREEEAEVEAGQQEEARGSGGATRGETAEVREQATE
SLVPSLLLSEPTAAAKAAALLAAEVAAKKKAEGGEGEEEQRARVASAPVT
VRAMADQPVAEIAITGQQDEETGAPAAGIHVVSPFADRTVPPPPLVRVTR
IQERPLAADVATDSALTLSSLAADAVAAAAAAEEEAGEDPRGRLDRGGAS
AVSALTLSSATEDSKEEEEEVWARSDMAAAGAGAATATTPAVVVRDAQQA
EAGVFFADSAAAVADRPAGGDDASGSGDATDLSAPTTAAAAAPKRRTTLL
GRAKRSLSSKKIAGDSKQKASAAAAATDANAAAAAAAAAAAASPVAGDSV
DEGASAAASVAAPPPSLSAAATATSGSSAPAPAATPCTVSRLQSFRNKAR
SFTGRRLSGGGSGPLSARLGGSSGPTPGRQRSLSGTGPLSLSSAKSKGKG
FFSMTTRATEEDTAAAAAGSGGEFESEGGGSVSPGSPGSEHGGFGGSGPS
DDGPL
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