prot_L-elsbetiae_contig5206.13301.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5206.13301.1
Unique Nameprot_L-elsbetiae_contig5206.13301.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length501
Homology
BLAST of mRNA_L-elsbetiae_contig5206.13301.1 vs. uniprot
Match: D7FNS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS3_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.690e-45
Identity = 126/318 (39.62%), Postives = 164/318 (51.57%), Query Frame = 0
Query:  221 DENTRFLQGVTKVGDAWARLAQRHQETGVVVVDESD-----------------VDEAGEEDPDDGFGGGEPRGDEKLHASAPARRGASAKRRDRKQGTSKQREKGGN-----GRKKPGPAPRKRDLLWDEGEHQRFVEGFEEHGSSWAEVARVVRTRNGEQVFRYALRWVDDDGRVRSKDNTKKTGQWGFDEHERFLEGIKKFGRAFQDVAIVVGTRSPGQVKKHAR----------------TGVG-----KAVPGAKKKP------WDKAEHERFLEAVAKHGCDWTAVAEAVGTRGKSQVHGRARLVLNKDLSLK 489
            DENTRFLQGVTK G AWARLAQ+H E GVV V+ES+                 VDE  + D   G GG +PR      A+ PA  G             K+  KGG+              R+    WD+ EH+RFV+GFE HG +WAEVA+VVRTR+  QV  Y+ RWV   G +   ++ +K G+W  DEH+RF+EG+K +GR++ DVA VV TR+  QV  HA                 T  G     +A P A+ +       W   EHE F++ V  +G  W +VA  +GTR   QV   A+  LNKDL+ K
Sbjct:    2 DENTRFLQGVTKHGGAWARLAQKHTELGVVAVEESEGEDGAHASRRNNDDSRHVDEGRDSD---GVGGDKPR---TSLAAGPAGEGTKQ--------PGKKARKGGDKXXXXXXXXXXXXXRRGSSEWDDEEHERFVKGFERHGKAWAEVAQVVRTRDEGQVQGYSARWVTRTGGLH--ESFRKIGEWEGDEHDRFMEGVKLYGRSWVDVASVVRTRTNRQVIMHAMHRLNDDLSSKPSLRACTSTGPQATDRAPPPAQPRAAVNGGDWGDDEHEAFMKGVKIYGRSWVSVARLMGTRTNEQVRAHAKQYLNKDLTEK 303          
BLAST of mRNA_L-elsbetiae_contig5206.13301.1 vs. uniprot
Match: A0A6H5KBL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBL5_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.490e-34
Identity = 133/399 (33.33%), Postives = 173/399 (43.36%), Query Frame = 0
Query:   61 SRDKEDAARMTDRVLAWALKSVGGSGSEGKTRRSQCGEGGDRSSSSSSGR-------------AVYLDPPEGWDGPESCPLPFAAERXXXXXXXXXXXXXXXXXXXXXXXXXXDNFPSRSWQKAHDGDRNGAFSATNGXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRGFWDRDENTRFLQGVTKVGDAWARLAQRHQETGVVVVDESDVDEAGEEDPDDGFGGGEPRGDEKLHAS--APARRGASAKRRDRKQGTSKQREKGGNGRKKPGPAPRKRDLL------------------WDEGEHQRFVEGFEEHGSSWAEVARVVRTRNGEQVFRYALRWVDDDGRVRSKDNTKKTGQWGFDEHERFLE--GIKKFGRAFQDVAIVVGTRSPGQVKKHA 424
            +R + D    TD VLAWAL+S+GG+G EG  R    G  GD +S  SSG               +Y +      GP S  LP   E                               +RS +   +GD      A +G                           +K GFWD+DENTRFLQ     G AWARLAQ+H E GVV V+ES+ +        DG        D   H      +  G   KRR    G +      G G K+PG                           WD+ EH+RFV+GFE HG +WAEVA+VVRTR+  QV  Y+ RWV   G +   ++ +K G+W  DEH+RF+E  G+K +GR++ DVA VV TR+  QV  HA
Sbjct:   34 NRKRGDTVTTTDSVLAWALRSIGGNGDEGTKRN--LGGVGDANSCGSSGXXXXXXXXXDSSPGVIYEEAKGDGGGPISRLLPREREGV-----------------------------NRSGRGGSNGDSGDV--AGSGDGAIGARDDGSSRKRSLGAREDREEESKKPGFWDKDENTRFLQH----GGAWARLAQKHAELGVVAVEESEGE--------DGAHASRRNKDANAHVDDGRDSDGGGGDKRRTSLAGPA------GEGTKQPGKKXXXXXXXXXXXXXXXXXXXXXXXNEWDDEEHERFVKGFERHGKAWAEVAKVVRTRDEGQVQAYSSRWVTLAGGLH--ESFRKIGEWEDDEHDRFMEARGVKLYGRSWVDVASVVRTRTNRQVIMHA 379          
BLAST of mRNA_L-elsbetiae_contig5206.13301.1 vs. uniprot
Match: W7TWH6_9STRA (SANT/Myb domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWH6_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.740e-7
Identity = 39/128 (30.47%), Postives = 66/128 (51.56%), Query Frame = 0
Query:  383 TGQWGFDEHERFLEGIKKFGRAFQDVA-IVVGTRSPGQVKKHA--------------RTGVGKAVPGA-----KKKPWDKAEHERFLEAVAKHGCDWTAVAEAVGTRGKSQVHGRARLVLNKDLSLKT 490
            +  W  +EH RFLEG+K++GR+++ ++ +++ TR+P ++K +A              RT   K   GA     K+  W   EHE FL+  AK+G  W  +++ + TR   Q+   A+    K   L+T
Sbjct:   80 SSDWTTEEHARFLEGLKQYGRSWESISTLLLPTRTPEEIKNYASLYLVNQPKDLTPPRTASTKGKDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRT 207          
BLAST of mRNA_L-elsbetiae_contig5206.13301.1 vs. uniprot
Match: A0A7S1SLZ4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLZ4_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 7.160e-5
Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
Query:  380 TKKTGQWGFDEHERFLEGIKKFGRAFQDVAIVVGTRSPGQVKKHA--------RTGVGKAVP 433
            TK+   W  +EHERF+EG++K+GR +++VA  V TR+P Q++ HA        +TGV   +P
Sbjct:  103 TKQRESWSAEEHERFMEGVEKYGRKWKEVAEHVNTRTPVQIRSHAQKYFIKLTKTGVQADIP 164          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5206.13301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FNS3_ECTSI1.690e-4539.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBL5_9PHAE1.490e-3433.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TWH6_9STRA1.740e-730.47SANT/Myb domain protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1SLZ4_9CHLO7.160e-541.94Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 436..484
e-value: 2.3E-10
score: 50.4
coord: 382..430
e-value: 1.1E-5
score: 34.9
coord: 322..370
e-value: 6.3E-6
score: 35.7
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 383..425
e-value: 2.4E-7
score: 30.9
coord: 326..366
e-value: 8.1E-8
score: 32.3
coord: 437..478
e-value: 2.1E-10
score: 40.6
NoneNo IPR availableGENE3D1.10.10.60coord: 386..430
e-value: 1.6E-7
score: 33.3
coord: 440..485
e-value: 3.4E-9
score: 38.6
NoneNo IPR availableGENE3D1.10.10.60coord: 326..385
e-value: 8.8E-7
score: 31.0
NoneNo IPR availablePANTHERPTHR44042:SF15DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEINcoord: 374..424
coord: 292..364
NoneNo IPR availablePANTHERPTHR44042FAMILY NOT NAMEDcoord: 374..424
coord: 292..364
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 432..486
score: 13.019
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 318..372
score: 11.958
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 378..428
score: 9.045
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 210..243
score: 5.343
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 376..424
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 434..488
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 325..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5206contigL-elsbetiae_contig5206:3925..8109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5206.13301.1mRNA_L-elsbetiae_contig5206.13301.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5206 3924..8109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5206.13301.1 ID=prot_L-elsbetiae_contig5206.13301.1|Name=mRNA_L-elsbetiae_contig5206.13301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=501bp
ARLSSLSGGGSGGTGETTAVTVEQRAPGLVDQGAVAAAVADAVAAAAAAT
DRVAPPSVGRSRDKEDAARMTDRVLAWALKSVGGSGSEGKTRRSQCGEGG
DRSSSSSSGRAVYLDPPEGWDGPESCPLPFAAERRRNRRKRRESGGSFES
FGGSSSSSSSDNFPSRSWQKAHDGDRNGAFSATNGGGTEASAAAVVAPGS
ESEDGGEERNKKRKRGFWDRDENTRFLQGVTKVGDAWARLAQRHQETGVV
VVDESDVDEAGEEDPDDGFGGGEPRGDEKLHASAPARRGASAKRRDRKQG
TSKQREKGGNGRKKPGPAPRKRDLLWDEGEHQRFVEGFEEHGSSWAEVAR
VVRTRNGEQVFRYALRWVDDDGRVRSKDNTKKTGQWGFDEHERFLEGIKK
FGRAFQDVAIVVGTRSPGQVKKHARTGVGKAVPGAKKKPWDKAEHERFLE
AVAKHGCDWTAVAEAVGTRGKSQVHGRARLVLNKDLSLKTAAPAPARPSK
R
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf