prot_L-elsbetiae_contig52.13289.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig52.13289.1
Unique Nameprot_L-elsbetiae_contig52.13289.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length538
Homology
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BLAST of mRNA_L-elsbetiae_contig52.13289.1 vs. uniprot
Match: D7FNB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB8_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 1.150e-193
Identity = 348/552 (63.04%), Postives = 398/552 (72.10%), Query Frame = 0 
Query:    1 MGKGNKGKNKASSGAG---EQKSLRSAVETAVNEAVKIQDSASDLGAAQAAAALEAAAQRYREALTRLPGHAEALYNLATCLSEQAD--LKANTSEKVVLLRESRATLQSVIAADTSGRGATTALAHHALGNVICALVEAFRDHCPTTAAAAAATVPCADCCVPCPSAAECKQELSQACRHLEEAVSITKRLQNQSGEIEVILVHLGDAFASMMHIVMDGASAERSQGSHGPPS----DAVQEALALCSDACRKYSEALSTATSSGGSDTDILRLKAGTVVNFLDWALPEAPPNQQPPSGALPCFGFSAEELLATGEQAVGVLLGLDVENVGGLLAKGDLCSRLRARVSMLSAPGAGVGMQGMQEEGSHREESLAWFARAVQRFPQDSEALTAAGEGLLEYGRRSMTVYREAAFSGHGGLGASSF--------SAPHLEGMRMSAVSRLQEAGSLLSRASSIDTPDTDSPYNAACAFALSGDAASCFQALSEFCRRLIATTAVAAPGGVSSSKRDAARWSLREAGGDADLEGVRGTEWFVGLLSSTDATLVG 535
            MGKG K    A+SGAG   +QK++R+AVET VN+AVK+QDSASDL A QA AAL+AAA +YREAL RLP HAEA YNLATCLSEQAD  L  +  E++ LL ESR+ L+SVI ADTSGRGATTALAHHALGNVICA+VEAF D  PT        V CAD  V CPSAA  K+ LS ACRH E +VSITKRLQNQSGE E +L+H GDA +SMM IVMD  +                  VQE L LCS+AC KYSEAL++ TSSGGSDTDILRLKAGTVVNFLDWALPEA P + P  G+    GF AEE+LA GE+AV  LL LD  ++ G+LAK DLC RLRAR SMLS  GA V     +EEG+ REES+AWFARA   FPQD+  LTAAGEGLLEYGRRSM +Y+E A    G +G S +        +APH+EGMRMSA++RLQEAG LL+ A S D  D +SPYNAACAFAL+GD  SCF+ALSE+CRRL     +AA G  SS KR+AAR SLREAG D DLE VRG  WFV LL  TDATLVG
Sbjct:    1 MGKGKKKAGGAASGAGGVGDQKAVRAAVETIVNDAVKLQDSASDLPAPQALAALQAAAAKYREALARLPRHAEAAYNLATCLSEQADSDLNPDMREQMALLSESRSLLESVIEADTSGRGATTALAHHALGNVICAVVEAFEDQRPT--------VQCADGSVECPSAAARKEHLSLACRHFEASVSITKRLQNQSGEAEEVLIHWGDALSSMMQIVMDDGATXXXXXXXXXXXXXXXSLVQEVLGLCSNACSKYSEALASETSSGGSDTDILRLKAGTVVNFLDWALPEALPPEAPIGGS--DVGFPAEEILAAGEEAVQALLALDDSSMDGMLAKADLC-RLRARTSMLS--GASV-----EEEGARREESVAWFARAATGFPQDAGVLTAAGEGLLEYGRRSMALYQEVAV---GSVGQSPYGYGSAPGPAAPHVEGMRMSAITRLQEAGRLLAEACSFDVSDANSPYNAACAFALAGDPGSCFRALSEYCRRLT----LAANG--SSGKREAARRSLREAGNDVDLEEVRGAPWFVDLLRGTDATLVG 525
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig52.13289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNB8_ECTSI1.150e-19363.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 51..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig52contigL-elsbetiae_contig52:52691..62425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig52.13289.1mRNA_L-elsbetiae_contig52.13289.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig52 52690..63143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig52.13289.1 ID=prot_L-elsbetiae_contig52.13289.1|Name=mRNA_L-elsbetiae_contig52.13289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=538bp
MGKGNKGKNKASSGAGEQKSLRSAVETAVNEAVKIQDSASDLGAAQAAAA
LEAAAQRYREALTRLPGHAEALYNLATCLSEQADLKANTSEKVVLLRESR
ATLQSVIAADTSGRGATTALAHHALGNVICALVEAFRDHCPTTAAAAAAT
VPCADCCVPCPSAAECKQELSQACRHLEEAVSITKRLQNQSGEIEVILVH
LGDAFASMMHIVMDGASAERSQGSHGPPSDAVQEALALCSDACRKYSEAL
STATSSGGSDTDILRLKAGTVVNFLDWALPEAPPNQQPPSGALPCFGFSA
EELLATGEQAVGVLLGLDVENVGGLLAKGDLCSRLRARVSMLSAPGAGVG
MQGMQEEGSHREESLAWFARAVQRFPQDSEALTAAGEGLLEYGRRSMTVY
REAAFSGHGGLGASSFSAPHLEGMRMSAVSRLQEAGSLLSRASSIDTPDT
DSPYNAACAFALSGDAASCFQALSEFCRRLIATTAVAAPGGVSSSKRDAA
RWSLREAGGDADLEGVRGTEWFVGLLSSTDATLVGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf