prot_L-elsbetiae_contig512.13184.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig512.13184.1
Unique Nameprot_L-elsbetiae_contig512.13184.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
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BLAST of mRNA_L-elsbetiae_contig512.13184.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 4.330e-38
Identity = 72/92 (78.26%), Postives = 84/92 (91.30%), Query Frame = 0 
Query:    1 MGSGLQSMLAETDSAGRLRIRAVARIKLLLEQVKDNIKDPDRSLCSDLQRMAELRPQVFREPELLEAVGEILTGRGAKTAIQASGGREAPCV 92
            MGSGLQ+ L ET+ +G LR +AV  IK LL+QVK+NIK+PDRSLCSDLQRMAELRP+VFREPELLE+VGE+LTG+GAKTAIQ+SGGREAPCV
Sbjct:   29 MGSGLQAALNETEDSGVLRTKAVDTIKGLLQQVKENIKNPDRSLCSDLQRMAELRPKVFREPELLESVGEVLTGKGAKTAIQSSGGREAPCV 120
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BLAST of mRNA_L-elsbetiae_contig512.13184.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 6.150e-26
Identity = 55/76 (72.37%), Postives = 65/76 (85.53%), Query Frame = 0 
Query:   17 RLRIRAVARIKLLLEQVKDNIKDPDRSLCSDLQRMAELRPQVFREPELLEAVGEILTGRGAKTAIQASGGREAPCV 92
            R+  R   +  LL+  V  NI++PDRSLCSDLQRMAELRP+VFREPELLEAVGE+LTG+GAKTAIQ+SGG+EAPCV
Sbjct:    4 RVDSRVWQQFTLLVVAVPANIQNPDRSLCSDLQRMAELRPKVFREPELLEAVGEVLTGKGAKTAIQSSGGQEAPCV 79
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig512.13184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPC4_ECTSI4.330e-3878.26Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus ... [more]
A0A6H5L4I3_9PHAE6.150e-2672.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig512contigL-elsbetiae_contig512:3176..4992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig512.13184.1mRNA_L-elsbetiae_contig512.13184.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig512 3176..4994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig512.13184.1 ID=prot_L-elsbetiae_contig512.13184.1|Name=mRNA_L-elsbetiae_contig512.13184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
MGSGLQSMLAETDSAGRLRIRAVARIKLLLEQVKDNIKDPDRSLCSDLQR
MAELRPQVFREPELLEAVGEILTGRGAKTAIQASGGREAPCV
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