prot_L-elsbetiae_contig4958.12927.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4958.12927.1
Unique Nameprot_L-elsbetiae_contig4958.12927.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length261
Homology
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BLAST of mRNA_L-elsbetiae_contig4958.12927.1 vs. uniprot
Match: A0A6H5JLT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT0_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.350e-24
Identity = 81/175 (46.29%), Postives = 102/175 (58.29%), Query Frame = 0 
Query:  110 LYDSTRQAIREASA-------LGRQQEA---------DLLQQTLDRLWKEAHDEGGGNQPRSGRS--------SGTPCHQQDEHDAEKVPISAHASGNGGAGGESSDATGVGRRREDECLGLLAEAFADDLDVLRKDSTFTGSSKNIAAMADMMRCLASGMDSTEQTMLLENATR 260
            LYD+ RQAIR+ASA        GR Q+A         DLL + L R  +E +    G Q  +  +        SG    Q+  HD  + P  A  +G+  +GGE   AT     +EDECLGL+AEAFADDLD+LRKD  F GS+ +IAAMADMMRC+A G+DS EQ MLL+NA R
Sbjct:   10 LYDAARQAIRDASAGGAATEAAGRDQDAYVAKRPQHNDLLDKKLHRSVEEMYQSTRGEQNSAQGTQDVQFSGISGNKKRQR--HDEVEKP--AEDAGDA-SGGEEGHAT----TQEDECLGLMAEAFADDLDLLRKDEHFGGSANDIAAMADMMRCIAGGLDSIEQRMLLDNAAR 175
[Close]
BLAST of mRNA_L-elsbetiae_contig4958.12927.1 vs. uniprot
Match: D8LNF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF4_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 9.750e-16
Identity = 66/159 (41.51%), Postives = 83/159 (52.20%), Query Frame = 0 
Query:  110 LYDSTRQAIREASA-------LGRQQEA---------DLLQQTLDRLWKEAHDEGGGNQPRSGRSSGTPCHQ------------QDEHDAEKVPISAHASGNGGAGGESSDATGVGRRREDECLGLLAEAFADDLDVLRKDSTFTGSSKNIAAMADMMR 240
            LYD+ R+AIR+ASA       +GR Q+A         D+L + L R  +E +    G Q  S  + GTP  Q            +  HD E+ P          AG  S    G    +EDECLGL+AEAFADDLD+LRKD  F GS+ +IAAMADMMR
Sbjct:   10 LYDAAREAIRDASAGGAAAEAVGRDQDACVATRPQHDDVLDKKLHRSVEEMYHSTRGQQNSS--TQGTPDVQLSASDSGVGNKKRQRHDGEEAPTED-------AGDASDGEEGHPTTQEDECLGLMAEAFADDLDLLRKDDHFGGSANDIAAMADMMR 159
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4958.12927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLT0_9PHAE1.350e-2446.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF4_ECTSI9.750e-1641.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4958contigL-elsbetiae_contig4958:8067..9701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4958.12927.1mRNA_L-elsbetiae_contig4958.12927.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4958 8062..10521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4958.12927.1 ID=prot_L-elsbetiae_contig4958.12927.1|Name=mRNA_L-elsbetiae_contig4958.12927.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=261bp
MRKSVGGGLGRMQTRSTHARPFATRHCTAPEQAQGRSRCSGLCLSQSFFC
SARPRHLAYQIFRTVLLKSKAHHPRSVRRHNPGGATRPTTLLWLKLKLKM
ASNTALHCRLYDSTRQAIREASALGRQQEADLLQQTLDRLWKEAHDEGGG
NQPRSGRSSGTPCHQQDEHDAEKVPISAHASGNGGAGGESSDATGVGRRR
EDECLGLLAEAFADDLDVLRKDSTFTGSSKNIAAMADMMRCLASGMDSTE
QTMLLENATR*
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