prot_L-elsbetiae_contig4944.12908.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4944.12908.1
Unique Nameprot_L-elsbetiae_contig4944.12908.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length188
Homology
BLAST of mRNA_L-elsbetiae_contig4944.12908.1 vs. uniprot
Match: D7FRU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU6_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.190e-33
Identity = 65/99 (65.66%), Postives = 76/99 (76.77%), Query Frame = 0
Query:    6 AWERWAYWSPAERHSGGAVVVCLLMYPVVVTTLLRVLDCWEVEGM------EGSWLRADTSVECSSGEHQKYQVMAAVFLGLYGLGLPLSLAAMVLWAR 98
            AWERW  WS AERH+  AVVVCLL+YPVV T LLRV DC + EG       EGSWLRADT+VECSSG+H  Y+++AA  LGLYGLGLPL+LA +V WA+
Sbjct:  838 AWERWGRWSAAERHTCAAVVVCLLLYPVVCTVLLRVFDCRDGEGNGDADDGEGSWLRADTTVECSSGQHTSYEMIAATCLGLYGLGLPLALATIVYWAK 936          
BLAST of mRNA_L-elsbetiae_contig4944.12908.1 vs. uniprot
Match: A0A6H5KU24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU24_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 6.360e-21
Identity = 47/71 (66.20%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    6 AWERWAYWSPAERHSGGAVVVCLLMYPVVVTTLLRVLDCWEV----EGMEGSWLRADTSVECSSGEHQKYQ 72
            AWERW  WS AERH+  AVVVCLL+YPVV T LLRV DC E     +  EGSWLRADT+VECSSG H+ Y+
Sbjct:  135 AWERWGRWSAAERHTCAAVVVCLLLYPVVCTVLLRVFDCREGNRDDDDGEGSWLRADTTVECSSGHHKSYE 205          
BLAST of mRNA_L-elsbetiae_contig4944.12908.1 vs. uniprot
Match: A0A0L0DF90_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DF90_THETB)

HSP 1 Score: 57.0 bits (136), Expect = 3.760e-6
Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 0
Query:   24 VVVCLLMYPVVVTTLLRVLDCWEVEGMEGSWLRADTSVECSSGEHQKYQVMAAVFLGLYGLGLPLSLAAMVL 95
            +++  L+YPV+V T L +  C    G+E S L +D  VEC  G H +Y  +AA+F+ LY +G+P+    +++
Sbjct: 1454 IILTFLVYPVLVRTTLSMYHCKSFVGIEHSRLVSDLEVECFVGRHAQYAGIAAIFVVLYVIGIPVGALLLMI 1525          
BLAST of mRNA_L-elsbetiae_contig4944.12908.1 vs. uniprot
Match: A0A7S4VBS8_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VBS8_9DINO)

HSP 1 Score: 54.7 bits (130), Expect = 2.150e-5
Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0
Query:   10 WAYWSPAERHSGGAVVVCLLMYPVVVTTLLRVLDCWEVEGMEGSWLRADTSVECSSGEHQKYQVMAAVFLGLYGLGLPL 88
            WA     +     A++V  ++YP VV TL+ +L C + +      LR D  VEC +G+H  + V+A   L +YG G+PL
Sbjct:  152 WALHESRDSKIRWAIIVVFVIYPAVVQTLVSILACEDYDTFR---LRVDADVECFTGDHFFWMVVAIFGLIVYGFGIPL 227          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4944.12908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FRU6_ECTSI1.190e-3365.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU24_9PHAE6.360e-2166.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0L0DF90_THETB3.760e-636.11Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A7S4VBS8_9DINO2.150e-535.44Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..72
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4944contigL-elsbetiae_contig4944:7027..9782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4944.12908.1mRNA_L-elsbetiae_contig4944.12908.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4944 7026..9782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4944.12908.1 ID=prot_L-elsbetiae_contig4944.12908.1|Name=mRNA_L-elsbetiae_contig4944.12908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
VGGGGAWERWAYWSPAERHSGGAVVVCLLMYPVVVTTLLRVLDCWEVEGM
EGSWLRADTSVECSSGEHQKYQVMAAVFLGLYGLGLPLSLAAMVLWARGG
GGAPSEVDDDDDDEEDDDGDDTTVAVRRIRGGGVLVQGGGDADLEAAATT
SSPTLSAGDGFNGSAAAAAAAAAAAAAAKTSTADGNNG
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