prot_L-elsbetiae_contig482.12708.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig482.12708.1
Unique Nameprot_L-elsbetiae_contig482.12708.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length199
Homology
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BLAST of mRNA_L-elsbetiae_contig482.12708.1 vs. uniprot
Match: D7FHI0_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI0_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 3.250e-85
Identity = 146/199 (73.37%), Postives = 169/199 (84.92%), Query Frame = 0 
Query:    1 MEGRRISWSGGGGSGMGNRGPASAERARLQALATEFKNLLGEAVKSAA-PASGAAHQATPPAVPEPKHFWLVPILHRLADIAERLEASYCRQPGVNAFDNRRFQHPIGQAIRLATLGSLENDRYSQPTSFVSDVLFGLMRSGGGLGGGALVLAAVCRFLCAVSMAPADQASRSAPPPPISTLLNEELELYEVVLSWARG 198
            MEGRR  WSG GG G   RGP SAER RLQALA EF +LL EAVKSA+ P +G   Q    ++PEPKHFWLVP+LHRLADIAERLEASYCRQPGVN F+NRR+ +PIGQAIRLAT+G++++DRYSQPT FV+ VLFGL+RSGGG+GGGA+VLAAVCRFLCAVSMA  DQ SR+APPPPI +LL+EE+E+YE VLSWARG
Sbjct:    1 MEGRRAVWSGSGGGGNVFRGPISAERVRLQALAKEFASLLAEAVKSASTPTAGEGAQGN--SIPEPKHFWLVPVLHRLADIAERLEASYCRQPGVNVFENRRYMYPIGQAIRLATMGTVDDDRYSQPTRFVTSVLFGLLRSGGGVGGGAIVLAAVCRFLCAVSMATVDQGSRTAPPPPIPSLLSEEIEIYEQVLSWARG 197
[Close]
BLAST of mRNA_L-elsbetiae_contig482.12708.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 1.260e-71
Identity = 131/196 (66.84%), Postives = 152/196 (77.55%), Query Frame = 0 
Query:   24 AERARLQALATEFKNLLGEAVKSAA-PASGAAHQATPPAVPEPKHFWLVPILHRLADIAERLE--------------------ASYCRQPGVNAFDNRRFQHPIGQAIRLATLGSLENDRYSQPTSFVSDVLFGLMRSGGGLGGGALVLAAVCRFLCAVSMAPADQASRSAPPPPISTLLNEELELYEVVLSWARG 198
            AER RLQ LA EF +LL EAVKSA+ P +G A Q    ++PEPKHFWLVPILHRLADIAERLE                    ASYCRQPGVN F+NRR+ +PIGQAIR AT+G+L++DRYSQPT FV+ VLFGL+RSGGG+GGGA+VLAAVCRFLCAVSMA  DQ SR+APPPP+  LL+EE+E+YE VLSWARG
Sbjct:   27 AERVRLQTLAEEFASLLAEAVKSASTPTAGEAAQGN--SIPEPKHFWLVPILHRLADIAERLELPRHVQYKTQQARLPPVAPQASYCRQPGVNVFENRRYLYPIGQAIRQATMGTLDDDRYSQPTRFVTSVLFGLLRSGGGVGGGAIVLAAVCRFLCAVSMATVDQGSRTAPPPPVPALLSEEVEIYEQVLSWARG 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig482.12708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHI0_ECTSI3.250e-8573.37LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JDL7_9PHAE1.260e-7166.84LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig482contigL-elsbetiae_contig482:34952..37759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig482.12708.1mRNA_L-elsbetiae_contig482.12708.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig482 31585..37759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig482.12708.1 ID=prot_L-elsbetiae_contig482.12708.1|Name=mRNA_L-elsbetiae_contig482.12708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=199bp
MEGRRISWSGGGGSGMGNRGPASAERARLQALATEFKNLLGEAVKSAAPA
SGAAHQATPPAVPEPKHFWLVPILHRLADIAERLEASYCRQPGVNAFDNR
RFQHPIGQAIRLATLGSLENDRYSQPTSFVSDVLFGLMRSGGGLGGGALV
LAAVCRFLCAVSMAPADQASRSAPPPPISTLLNEELELYEVVLSWARGE
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