prot_L-elsbetiae_contig4810.12693.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4810.12693.1
Unique Nameprot_L-elsbetiae_contig4810.12693.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length310
Homology
BLAST of mRNA_L-elsbetiae_contig4810.12693.1 vs. uniprot
Match: A0A6H5JB47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB47_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 1.000e-35
Identity = 81/200 (40.50%), Postives = 121/200 (60.50%), Query Frame = 0
Query:   11 SLLMMRLSASVAEKDPTVCERVLVEIAAGELESETHSGRFYDVGEGMEFKSLYRSEGNYLLQFIT----EDDQYYTYQDPLTPEELSNEPDDVTLDVDEDPRVDRRVLAECGSAGTGFWVIGLKGEGDIAMHPMIKVSDCAEDPTEIDGDSVWFRQQCNECEKEEIDGEVTISLEEYPCDSFSFPPTPAPEPVTIVDPDS 206
            +LL+MRL+ S A+   T C++++V++ +  + S THSG FY+VG   + + + ++ G+Y LQFI     +D+ Y TY +P    + SNEP D  L+++     +        +A  G+WVIG  G+ D+AM+PM+KV+DCA DPT ID DSVWF Q  +E E++   GEVTI+LE Y CDS          P  ++D DS
Sbjct:    2 ALLVMRLAVSAADTTET-CQKLVVDVES--ISSGTHSGDFYEVGTTSDGRPVLKTNGDYSLQFIAAGSMDDEDYLTYTEPDA--DASNEPMDEDLEIELVSTAESETFRRSLTATCGYWVIGKIGDTDVAMYPMLKVADCATDPTAIDTDSVWFLQATHESEEDYSIGEVTIALENYDCDS----------PDAVIDGDS 186          
BLAST of mRNA_L-elsbetiae_contig4810.12693.1 vs. uniprot
Match: D7FH59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH59_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.190e-33
Identity = 77/192 (40.10%), Postives = 116/192 (60.42%), Query Frame = 0
Query:    1 MRESGGIAIASLLMMRLSASVAEKDPTVCERVLVEIAAGELESETHSGRFYDVGEGMEFKSLYRSEGNYLLQFIT----EDDQYYTYQDPLTPEELSNEPDDVTLDVDEDPRVDRRVLAECGSAGTGFWVIGLKGEGDIAMHPMIKVSDCAEDPTEIDGDSVWFRQQCNECEKEEIDGEVTISLEEYPCDSF 188
            M+ SG  A  +LL MRL+ S A    T C++++V++ +  + S TH+G FY+VG   + + + ++ G+Y LQFI     +D+ Y TY +P    +  NEP D  L+++     D        +   G+WVIG  G+ D+AM+PM+KV+DCA DPT ID DS WF Q  +E E++   GEVT++LE+Y CDS 
Sbjct:    1 MKASGTCAGMALLTMRLAVSAAATTET-CQKLVVDVES--MSSGTHTGSFYEVGTTSDGRPVLKTNGDYSLQFIAAGSMDDEDYLTYTEPDA--DSLNEPMDEDLEIELLSIADNESFRRSLTTTCGYWVIGKIGDNDVAMYPMLKVADCAIDPTAIDTDSAWFLQATHESEEDYSIGEVTMTLEDYDCDSL 187          
BLAST of mRNA_L-elsbetiae_contig4810.12693.1 vs. uniprot
Match: D7FH60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH60_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 5.700e-27
Identity = 73/184 (39.67%), Postives = 97/184 (52.72%), Query Frame = 0
Query:   29 CERVLVEIAAGELESETHSGRFYDVGEGMEFKSLYRSEGNYLLQFITEDDQYYTYQDPL-----TPEELSNEPDDVTLDVD-------EDPRVDRRVLAECGSAGTGFWVIGLKGEGDIAMHPMIKVSDCAEDPTEIDGDSVWFRQQCNECEKEEIDGEVTISLEEYPCDSFSFPPTPAPEPVT 200
            CERV+VE++  E    THSGRFY VG  +E   L +++G   LQF+         Q PL            EP D +LD D       E+P   R + A CG      WVIG  G  D A++PMIKVSDCA  P  I+ DSVWF Q+C +CE+    G+VT++ E  PC + +F  T   + +T
Sbjct:   70 CERVVVEVSTPE--HATHSGRFYQVGTSLEGTPLLKTDGGLCLQFVEGGSAREEEQPPLLLHVGAHAAADGEPRDESLDFDMSDVSEEEEPVFRRSIAATCG-----HWVIGRMGTADAALYPMIKVSDCARHPAFINEDSVWFGQECLDCEERSTIGKVTVTTERCPCSNKTFERTSQAQAMT 246          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4810.12693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JB47_9PHAE1.000e-3540.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH59_ECTSI1.190e-3340.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FH60_ECTSI5.700e-2739.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..309
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.585

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4810contigL-elsbetiae_contig4810:2914..10632 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4810.12693.1mRNA_L-elsbetiae_contig4810.12693.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4810 2030..12915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4810.12693.1 ID=prot_L-elsbetiae_contig4810.12693.1|Name=mRNA_L-elsbetiae_contig4810.12693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp
MRESGGIAIASLLMMRLSASVAEKDPTVCERVLVEIAAGELESETHSGRF
YDVGEGMEFKSLYRSEGNYLLQFITEDDQYYTYQDPLTPEELSNEPDDVT
LDVDEDPRVDRRVLAECGSAGTGFWVIGLKGEGDIAMHPMIKVSDCAEDP
TEIDGDSVWFRQQCNECEKEEIDGEVTISLEEYPCDSFSFPPTPAPEPVT
IVDPDSALGVTPAPVTTVDPDSALGVTPAPVTTVDPDSARDGEEGEDGAE
DGPDSLDVDDSTASDDTDAAVQLDEDGASKAGGLRVGLGVAVSALGVAAA
NVFANAMQC*
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