prot_L-elsbetiae_contig481.12690.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig481.12690.1
Unique Nameprot_L-elsbetiae_contig481.12690.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length139
Homology
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: D7FPJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ0_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 4.750e-60
Identity = 120/138 (86.96%), Postives = 127/138 (92.03%), Query Frame = 0
Query:    1 MGRSRRSAPARRPXXXXXXXXXXXXXXXXXXQQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGGGGSDAPAEQAQEPAAAAQTYQQPSVDPCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQLESKKNYN 138
            MGRSRRSAPARRPXXXXXXXXXXXXXXXXXX  SGGGGML+GMASTMAQGFAFGTGSSIAHRAVG++MGGGGS AP EQAQE   A Q YQQP VDPCD+DK NFGQCLQNNNNDVTACQFVFEALQTCQ+E+KK+YN
Sbjct:    1 MGRSRRSAPARRPXXXXXXXXXXXXXXXXXXXXSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGAVMGGGGSSAPVEQAQE--QAPQAYQQPPVDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKSYN 136          
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: H3G8I8_PHYRM (CHCH domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3G8I8_PHYRM)

HSP 1 Score: 100 bits (250), Expect = 1.810e-24
Identity = 63/152 (41.45%), Postives = 85/152 (55.92%), Query Frame = 0
Query:    1 MGRSRRSAPARRPXXXXXXXXXXXXXXXXXXQQS------------GGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGG--GGSDAPAEQAQEPAAAA-QTYQQPSVDPCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQLESKKNY 137
            MGRSR S PA RP                   ++             GGGM+SG+  T+AQG AFGTGS+IAHRAVG++ G   GGSDAP EQ   PAA   QT Q P  + C  D+ +F +CL NN+ND+++CQF  +  + CQ++ +  +
Sbjct:    1 MGRSRSSRPAARPAPRRAPAPAQPRRSAPAPARTQAAPXXXXXXXXSGGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSFSGGSDAPQEQEAAPAAQDHQTAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQMQQQSTF 152          
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: A0A7R9VMR5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VMR5_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.440e-24
Identity = 56/106 (52.83%), Postives = 70/106 (66.04%), Query Frame = 0
Query:   32 QQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSI---MGGGGSDAPAEQAQEPAAA----AQTYQQPSVDPCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            QQSGGGGM+SG+ ST+AQG AFGTGS+IAHRAVG++    GGGG +AP +     A A     Q   Q    PCD DK  F +CLQ N  D  +C+F+++ LQTCQ
Sbjct:   41 QQSGGGGMMSGIGSTIAQGMAFGTGSAIAHRAVGAVAGSFGGGGEEAPQDSVAGAAPADAYGQQQQMQQMAGPCDQDKQMFFECLQMNKGDQESCRFLYDTLQTCQ 146          
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: A0A421EVM3_9STRA (CHCH domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EVM3_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.910e-23
Identity = 79/149 (53.02%), Postives = 100/149 (67.11%), Query Frame = 0
Query:    1 MGRSR-RSAPARRPXXXXXXXXXXXXXXXXXX------QQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGG--GGSDAPAEQAQEPAAAAQTYQQ---PSVDPCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQLESKKNY 137
            MGRSR R+APARR   XXXXXXXXXXXXX           S GGGM+SG+  T+AQG AFGTGS+IAHRAVG++ G   GGSDAP  Q QE A A Q YQ    P  + C  D+ +F +CL NN+ND+++CQF  +  + CQL+ + ++
Sbjct:    1 MGRSRSRAAPARRAPAXXXXXXXXXXXXXTQAAXXXAPHTSSGGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSMSGGSDAP--QQQEAAPAQQDYQAAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQLQQQSSF 147          
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: A0A7S2PCQ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCQ3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.320e-21
Identity = 61/127 (48.03%), Postives = 78/127 (61.42%), Query Frame = 0
Query:    6 RSAPARRPXXXXXXXXXXXXXXXXXXQQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGG-GGSDAPAEQAQEPAAAAQTYQQPSV-DPCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            RS PARRP                  QQS GGGM+SG+AST+AQG AFGTGS+IAHRAVG++ G  GGS   AE   + +      QQP++   C  DK  F +CLQ N  D ++CQF+++AL+TCQ
Sbjct:   15 RSVPARRPASTPAPA-----------QQSSGGGMMSGLASTVAQGMAFGTGSAIAHRAVGAVAGSFGGSGGDAEIPAQTSQQMGYEQQPTLASACADDKQMFYECLQMNKGDQSSCQFLYDALKTCQ 130          
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: A0A836CNH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.250e-21
Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 0
Query:   39 MLSGMASTMAQGFAFGTGSSIAHRAVGSIMGG-GGSDAPAEQAQEPAAAA---QTYQQPSVDPCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQLESKK 135
            +LSGMAST+AQGFAFGTGS++AHRAVG++ G  GGS + A Q QEPAA     Q  QQ +   CD DK NF +CLQ  N +  +CQF++E+LQ+CQ   ++
Sbjct: 2051 LLSGMASTVAQGFAFGTGSAMAHRAVGAVAGSFGGSGSEAAQQQEPAAGVSGGQYNQQSAAMACDNDKQNFFKCLQEQNGNAASCQFLYESLQSCQANHQQ 2151          
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: A0A7S1E0N2_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E0N2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.590e-21
Identity = 54/101 (53.47%), Postives = 63/101 (62.38%), Query Frame = 0
Query:   32 QQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGG--GGSDAPAEQAQEPAAAAQTYQQPSVDPCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            Q S GGGMLSG+ ST+AQG AFGTGS+IAH+AVG++ G   GG  APAEQ           QQP    C  DK  F +CLQ N  D  AC F++E LQ CQ
Sbjct:   39 QASSGGGMLSGIGSTIAQGMAFGTGSAIAHQAVGAVAGSLSGGGAAPAEQQYNETQPMAQQQQPIQGSCAQDKQMFFECLQVNKGDQQACSFLYENLQACQ 139          
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: A0A3F2RDV9_9STRA (CHCH domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RDV9_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 5.370e-21
Identity = 79/149 (53.02%), Postives = 100/149 (67.11%), Query Frame = 0
Query:    1 MGRSR-RSAPARRPXXXXXXXXXXXXXXXXXX------QQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGG--GGSDAPAEQAQEPAAAAQTYQQ---PSVDPCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQLESKKNY 137
            MGRSR R+APARR  XXXXXXXXXXXXXX           S GGGM+SG+  T+AQG AFGTGS+IAHRAVG++ G    GSDAP  Q QE A A Q YQ    P  + C  D+ +F +CL NN+ND+++CQF  +  + CQL+ + ++
Sbjct:  238 MGRSRSRAAPARRAPXXXXXXXXXXXXXXTQAAXXPAPHTSSGGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSMSAGSDAP--QQQEAAPAQQDYQAAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQLQQQSSF 384          
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: A0A4D9CYI4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYI4_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.930e-20
Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = 0
Query:   32 QQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGG--GGSDAPAEQ---AQEPAAAAQTYQQPSVD---PCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQLESK 134
            Q   GGGM+SG AST+AQGFAFGTGS++AHRAVG+  G   G S+AP +Q   AQ+P A  Q Y  P+     PC +D  NF  CLQ N  +V AC F++E+LQ CQ +++
Sbjct:   39 QPQQGGGMMSGFASTIAQGFAFGTGSAVAHRAVGAAAGAFSGDSEAPHQQEAYAQQP-AHQQQYAAPAQGGQGPCALDGQNFQACLQANPGNVDACTFLYESLQQCQRQAQ 148          
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Match: A0A7S2CIA8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIA8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.360e-20
Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 0
Query:   36 GGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMG---GGGSDAPAEQAQEPAAAAQTYQQP--SVDPCDMDKTNFGQCLQNNNNDVTACQFVFEALQTCQLESKK 135
            GGGM+SG+  T+AQG AFGTGS+IAHRAVG++ G   GG  + P        A AQ  QQP  S+  C+ D+ NF  CLQ+N+ DV +C   F+ LQ CQ ++K+
Sbjct:   60 GGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSMMGGNEEQP--------AVAQASQQPQSSIQSCEYDQKNFYDCLQSNHGDVNSCDMYFQQLQACQAQAKQ 156          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig481.12690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPJ0_ECTSI4.750e-6086.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
H3G8I8_PHYRM1.810e-2441.45CHCH domain-containing protein n=12 Tax=Phytophtho... [more]
A0A7R9VMR5_9STRA7.440e-2452.83Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A421EVM3_9STRA1.910e-2353.02CHCH domain-containing protein n=2 Tax=Phytophthor... [more]
A0A7S2PCQ3_9STRA1.320e-2148.03Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A836CNH7_9STRA4.250e-2154.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1E0N2_9STRA4.590e-2153.47Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A3F2RDV9_9STRA5.370e-2153.02CHCH domain-containing protein n=2 Tax=Phytophthor... [more]
A0A4D9CYI4_9STRA1.930e-2051.35Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2CIA8_9STRA2.360e-2048.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13523:SF2IP04476P-RELATEDcoord: 1..134
NoneNo IPR availablePANTHERPTHR13523COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77coord: 1..134
IPR009069Cysteine alpha-hairpin motif superfamilySUPERFAMILY47072Cysteine alpha-hairpin motifcoord: 94..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig481contigL-elsbetiae_contig481:20589..24040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig481.12690.1mRNA_L-elsbetiae_contig481.12690.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig481 20522..24810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig481.12690.1 ID=prot_L-elsbetiae_contig481.12690.1|Name=mRNA_L-elsbetiae_contig481.12690.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp
MGRSRRSAPARRPAPRSAPPARQAPAQPPAPQQSGGGGMLSGMASTMAQG
FAFGTGSSIAHRAVGSIMGGGGSDAPAEQAQEPAAAAQTYQQPSVDPCDM
DKTNFGQCLQNNNNDVTACQFVFEALQTCQLESKKNYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009069Cys_alpha_HP_mot_SF