prot_L-elsbetiae_contig4801.12683.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4801.12683.1
Unique Nameprot_L-elsbetiae_contig4801.12683.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length210
Homology
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: D8LIY3_ECTSI (Peroxisomal membrane protein PEX14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY3_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 7.790e-76
Identity = 137/217 (63.13%), Postives = 164/217 (75.58%), Query Frame = 0
Query:    3 IREDMVKRAVGFLRHPKVTGAPQEKQTRFLKDKKLTSLEIAEALKRAAEAGAVEASAKARADLMSAPTRRVRKGPVRSEAVVSGGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAEQQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNPPTRTVVQTGAFAAGGSDSG----------VRVSVSVTAHL 209
            IR+DMVKRAV FLRHPKV GAP+ KQ  FLKDK+LT+ EI EAL++AAE  A EASAK RA L++APT+R +KG VRSEAV SGG+++IS QTA+ PSP A  +   GEG  G A  ESL+ EQQA +AL+ ++ LL+EVGSS SKVVSA++CVRDLGQDL GV+ AWGRWID+DNPP RTV+QTGA   GG              +RVSVSVTAHL
Sbjct:    4 IRQDMVKRAVSFLRHPKVKGAPEAKQIAFLKDKQLTAEEIGEALRKAAELAAAEASAKTRAALVAAPTKRFQKGSVRSEAVASGGIVFISGQTAL-PSPTAGDD--SGEGDVGVA--ESLSPEQQAARALDKIKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVIQTGAIVGGGVGGAKPRRGGESIDIRVSVSVTAHL 215          
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: L1JS80_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JS80_GUITC)

HSP 1 Score: 63.9 bits (154), Expect = 1.370e-9
Identity = 35/117 (29.91%), Postives = 60/117 (51.28%), Query Frame = 0
Query:   71 RRVRKGPVRSEAVVS-GGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAEQQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNPPTRTVVQ 186
            RR+R G  R   +V  GG++Y++ QT                      S E  +   Q  + LE +++LL E GS  S++++AM+ ++D+ +D  G++  W  W+D +N PTR  V+
Sbjct:   13 RRLRTGDPRCSGIVCYGGIVYLTGQT----------------------SDEGEDIRSQTRRVLEKIDALLAEAGSDKSRLLTAMIWLKDIQRDFHGMNAVWNDWVDAENKPTRACVE 107          
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: A0A432V142_9HYPH (RidA family protein n=1 Tax=Pseudaminobacter arsenicus TaxID=1851146 RepID=A0A432V142_9HYPH)

HSP 1 Score: 58.2 bits (139), Expect = 1.360e-7
Identity = 36/112 (32.14%), Postives = 54/112 (48.21%), Query Frame = 0
Query:   71 RRVRKGPVRSEAVVSGGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAEQQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNPPTR 182
            +R+     RS AVV G ++Y+  Q   S                     +  + + Q  + L  ++ LL+E GSS SKVVSA + ++ +  D DG++  W  WID DNPP R
Sbjct:    5 KRIDANSRRSRAVVVGNMVYLGGQVGDS---------------------KQADIKVQTRETLAKIDQLLEEAGSSRSKVVSATIWLKSM-DDYDGMNEIWDAWIDADNPPAR 94          
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: A0A8D3XYA4_9PSED (Endoribonuclease n=4 Tax=Pseudomonas balearica TaxID=74829 RepID=A0A8D3XYA4_9PSED)

HSP 1 Score: 57.8 bits (138), Expect = 2.250e-7
Identity = 40/143 (27.97%), Postives = 68/143 (47.55%), Query Frame = 0
Query:   69 PTRRVRKGPVRSEAVVSGGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAE--QQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNPPTRTVVQTGAFAAGGSDSGVRVSVSVTAHL 209
            P RR+      SEAV+  G +Y+S Q A                       + L+ +  QQ  + L +++ LL EVG+  ++++SA++ +RD+  D  G++  W  W+   + P RT V+   +A       VRV ++V A L
Sbjct:    2 PIRRLHTETRYSEAVIHSGTVYLSGQLA-----------------------DDLSGDIRQQTRETLASIDRLLAEVGTDKTRLLSALIHLRDIDGDYAGMNEVWDAWVPAGSAPARTTVRAEMYAPQ-----VRVEITVVAAL 116          
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: UPI001CC4640A (RidA family protein n=1 Tax=Cupriavidus pampae TaxID=659251 RepID=UPI001CC4640A)

HSP 1 Score: 57.0 bits (136), Expect = 4.430e-7
Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 0
Query:   80 SEAVVSGGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAEQQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNP--PTRTVVQTGAFAAGGSDSGVRVSVSVTA 207
            S+ V  GGL+Y+  QTA   S  A+G+ T                  Q ++ L  VE+LL E GSSPS+++SA + +RD+ +D  G++  W  W+ + N   P RT V+     A  +  G+RV V++ A
Sbjct:   13 SKIVRHGGLVYLCGQTAKG-SVSATGDITA-----------------QTSEVLSRVEALLTEAGSSPSRLLSATVYLRDI-KDFAGMNAVWEEWLADSNAESPVRTTVE-----AALATEGLRVEVTIVA 118          
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: UPI001E314DF5 (RidA family protein n=1 Tax=Bordetella petrii TaxID=94624 RepID=UPI001E314DF5)

HSP 1 Score: 55.8 bits (133), Expect = 1.900e-6
Identity = 34/107 (31.78%), Postives = 54/107 (50.47%), Query Frame = 0
Query:   80 SEAVVSGGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAEQQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNPPTRTVVQ 186
            S+AVV G  +Y++ Q A  P   A+G                     QA + LE ++ LL   GS  S+V+SA++ ++D+ +DLD V+  W  W+     PTRT ++
Sbjct:   47 SKAVVHGDTVYLAGQVAQDPGVDAAG---------------------QARQVLEQIDELLGRCGSDKSRVISALVLLKDM-RDLDAVNTIWDAWVVPGRMPTRTPME 131          
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: UPI000B89187A (RidA family protein n=1 Tax=Cupriavidus sp. YR651 TaxID=1855315 RepID=UPI000B89187A)

HSP 1 Score: 55.1 bits (131), Expect = 2.280e-6
Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 0
Query:   80 SEAVVSGGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAEQQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNP--PTRTVVQTGAFAAGGSDSGVRVSVSVTA 207
            S+ V  GGL+Y+  QTA                  G+ASA    A Q  ++ L  VE+LL E GSSPS+++SA + +RD+ +D  G++  W  W+ ++    P RT V+     A  +  G+RV V++ A
Sbjct:   13 SKVVRYGGLVYLCGQTAK-----------------GSASATGDIAAQ-TSEVLSRVEALLTEAGSSPSRLLSATVYLRDI-RDFSGMNAVWEGWLADNKAEAPVRTTVE-----AALATEGLRVEVTIVA 118          
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: UPI0018E2F7A5 (RidA family protein n=1 Tax=Caulobacter hibisci TaxID=2035993 RepID=UPI0018E2F7A5)

HSP 1 Score: 54.7 bits (130), Expect = 2.570e-6
Identity = 34/117 (29.06%), Postives = 58/117 (49.57%), Query Frame = 0
Query:   72 RVRKGPVRSEAVVSGGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAE--QQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNPPTRTVVQ 186
            R+ K    S+AVV+GGL+++S   A                       E++     +Q  + L  ++  L + G+  SK+VSA + + D+GQ +  ++ AW  W+D +NPP RT V+
Sbjct:    4 RIGKAARWSDAVVAGGLVFLSGHVAE----------------------ETVGGSVLEQTKEVLAQIDDTLAQAGTDKSKLVSATIHLADIGQ-IAAMNAAWDAWVDPENPPARTTVE 97          
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: A0A328XNC7_9BURK (Enamine deaminase RidA (YjgF/YER057c/UK114 family) n=2 Tax=Paraburkholderia TaxID=1822464 RepID=A0A328XNC7_9BURK)

HSP 1 Score: 52.0 bits (123), Expect = 2.530e-5
Identity = 32/117 (27.35%), Postives = 56/117 (47.86%), Query Frame = 0
Query:   71 RRVRKGPVRSEAVVSGGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAEQQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNPPTRTVVQT 187
            +R   G   S+AVV GG ++++ Q A  PS    G                     Q  + L+ +++LLQ+VGS  +K++SA + + D  Q  + ++  W  W+ E + P R  V++
Sbjct:    4 KRYESGKRMSQAVVYGGFVFLAGQVAADPSEDVKG---------------------QTGQILKKIDTLLQQVGSDKTKILSASIWLADY-QTFNEMNEVWDAWVPEGDAPARACVES 98          
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Match: UPI001E625B0A (RidA family protein n=2 Tax=Denitromonas sp. (strain IR12) TaxID=2795389 RepID=UPI001E625B0A)

HSP 1 Score: 52.0 bits (123), Expect = 2.750e-5
Identity = 36/115 (31.30%), Postives = 55/115 (47.83%), Query Frame = 0
Query:   72 RVRKGPVRSEAVVSGGLIYISEQTAMSPSPPASGNGTKGEGADGAASAESLNAEQQATKALENVESLLQEVGSSPSKVVSAMLCVRDLGQDLDGVDLAWGRWIDEDNPPTRTVVQ 186
            R   GP  S+ V  GGL+Y+  QTA                  GA   E + A+ + T  L  V+ LL E GS  S+++SA++ ++D+  D   ++  W  W+  D  P RT V+
Sbjct:    6 RFHPGPRMSKIVRHGGLVYLCGQTAG-----------------GAEGLEGVTAQTEET--LARVDRLLAEAGSDRSRILSALIHLKDMA-DFAAMNAVWEAWLPADAAPARTTVE 100          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4801.12683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LIY3_ECTSI7.790e-7663.13Peroxisomal membrane protein PEX14 n=1 Tax=Ectocar... [more]
L1JS80_GUITC1.370e-929.91Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A432V142_9HYPH1.360e-732.14RidA family protein n=1 Tax=Pseudaminobacter arsen... [more]
A0A8D3XYA4_9PSED2.250e-727.97Endoribonuclease n=4 Tax=Pseudomonas balearica Tax... [more]
UPI001CC4640A4.430e-733.85RidA family protein n=1 Tax=Cupriavidus pampae Tax... [more]
UPI001E314DF51.900e-631.78RidA family protein n=1 Tax=Bordetella petrii TaxI... [more]
UPI000B89187A2.280e-633.85RidA family protein n=1 Tax=Cupriavidus sp. YR651 ... [more]
UPI0018E2F7A52.570e-629.06RidA family protein n=1 Tax=Caulobacter hibisci Ta... [more]
A0A328XNC7_9BURK2.530e-527.35Enamine deaminase RidA (YjgF/YER057c/UK114 family)... [more]
UPI001E625B0A2.750e-531.30RidA family protein n=2 Tax=Denitromonas sp. (stra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..141
NoneNo IPR availablePANTHERPTHR23058:SF0PEROXISOMAL MEMBRANE PROTEIN PEX14coord: 2..62
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 80..191
e-value: 3.2E-10
score: 40.0
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 71..209
e-value: 2.6E-21
score: 77.6
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 79..192
IPR006785Peroxisome membrane anchor protein Pex14p, N-terminalPFAMPF04695Pex14_Ncoord: 4..89
e-value: 1.4E-13
score: 51.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..59
e-value: 2.8E-16
score: 60.5
IPR025655Peroxisomal membrane protein 14PANTHERPTHR23058PEROXISOMAL MEMBRANE PROTEIN PEX14coord: 2..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4801contigL-elsbetiae_contig4801:11010..12369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4801.12683.1mRNA_L-elsbetiae_contig4801.12683.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4801 10990..12787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4801.12683.1 ID=prot_L-elsbetiae_contig4801.12683.1|Name=mRNA_L-elsbetiae_contig4801.12683.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=210bp
MAIREDMVKRAVGFLRHPKVTGAPQEKQTRFLKDKKLTSLEIAEALKRAA
EAGAVEASAKARADLMSAPTRRVRKGPVRSEAVVSGGLIYISEQTAMSPS
PPASGNGTKGEGADGAASAESLNAEQQATKALENVESLLQEVGSSPSKVV
SAMLCVRDLGQDLDGVDLAWGRWIDEDNPPTRTVVQTGAFAAGGSDSGVR
VSVSVTAHL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006175YjgF/YER057c/UK114
IPR035959RutC-like_sf
IPR006785Pex14_N
IPR036388WH-like_DNA-bd_sf
IPR025655PEX14