prot_L-elsbetiae_contig4801.12682.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4801.12682.1
Unique Nameprot_L-elsbetiae_contig4801.12682.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length303
Homology
BLAST of mRNA_L-elsbetiae_contig4801.12682.1 vs. uniprot
Match: A0A6H5K4C0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4C0_9PHAE)

HSP 1 Score: 447 bits (1149), Expect = 5.540e-156
Identity = 243/306 (79.41%), Postives = 262/306 (85.62%), Query Frame = 0
Query:    1 SLVGALLALAGGRSVNAFAMGGALRPAVGR-GVFAGAPLTSGSLTRRPEQHRGGAVSTSRGCARMLAGQEFATCSDDDFRAYIIGWTLVWSGIIPYTIIASK---NVLGEVIGFKARPVVKEGEDATISNQGLLLYKDPIKLLDIVNIVGRFQTFDDVQNKKKDTGAMSDFLFRDTFKASGFKLENLRRSKFKGWPKGPDGQPALRDAFGGDVKAVTRGMAKRELSESAMDAVFDSFVGSPLSIVADRFKVDNQLDKWRKDNTFDVKGFEQGLLVGRLLFLFTIVSLIGLLLAGYGVFFVEPLIIR 302
            SLVG LLALAG RS +AFA GGA R A+GR    +GAP+ S   T R E +R  A S SRG ARMLAGQ+FATCS+ DFRAYIIGWT VWSGIIPYT IASK   NVLGEVIGFKAR  VKEGEDATISNQ LLLYKDPIKLLDIVNIVGRFQTFDDVQ+KK   G MSD+LFR+TFK      ENLRRSKFKGWP GPDGQPAL+DAFGGDVKAV+R MAKRELS++AMDAVFDSFVGSPLS+VADRFKVDNQLD WRKDNTFD+KGFEQGLLVGRLLFLFTIVSL+GLLLAGYGVFFV+P+IIR
Sbjct:    6 SLVGVLLALAGRRSADAFASGGASRHAIGRRSALSGAPVASIVSTTRSEMNRVRAASPSRGSARMLAGQDFATCSEADFRAYIIGWTFVWSGIIPYTFIASKAIQNVLGEVIGFKARSTVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDVQDKKG--GVMSDYLFRNTFK------ENLRRSKFKGWPAGPDGQPALKDAFGGDVKAVSRTMAKRELSDTAMDAVFDSFVGSPLSLVADRFKVDNQLDNWRKDNTFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQPIIIR 303          
BLAST of mRNA_L-elsbetiae_contig4801.12682.1 vs. uniprot
Match: A0A835YTS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS8_9STRA)

HSP 1 Score: 170 bits (431), Expect = 2.620e-48
Identity = 96/228 (42.11%), Postives = 141/228 (61.84%), Query Frame = 0
Query:   76 DDFRAYIIGWTLVWSGIIPYTIIASKNVLGEVIGFKARPVVKEGEDATISNQGLLLYKDPIKLLDIVNIVGRFQTFDDVQNKKKDTGAMSDFLFRDTFKASGFKLENLRRSKFKGWPKGPDGQPALRDAFGGDVKAVTRGMAKRELSESAMDAVFDSFVGSPLSIVADRFKVDNQLDKWRKD-NTFDVKGFEQGLLVGRLLFLFTIVSLIGLLLAGYGVFFVEPLIIR 302
            ++F   +    L + GI+PYTI+A+K++  +V GF+A P VK GE+ T+SNQ LLLY +PI+L+D++NIV RF++FD++Q++ +D G  S++L R+ FK     L        K WP   +G P  +D F     A  +    +E+ +SA+D VFD F GS  + +ADRFKV+  LD WR D  +F+V  FE+ LLV R   LF    L+ L LA + VFF+ PL +R
Sbjct:   12 NEFNTVVGFMALAFQGILPYTIMANKSIFSDVGGFRALPAVKTGEEVTVSNQPLLLYGEPIRLIDVINIVSRFESFDELQDELRDDGNRSNYLRREYFKQKVLTLAP------KAWPADENGVPVGQDMFASTSVATLK---NKEIRDSALDVVFDVFSGSSRAYIADRFKVEYNLDSWRPDARSFNVAAFEKDLLVTRYSILFIYAVLLLLQLACWSVFFINPLALR 230          
BLAST of mRNA_L-elsbetiae_contig4801.12682.1 vs. uniprot
Match: A0A7S2USE2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USE2_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.510e-20
Identity = 60/161 (37.27%), Postives = 86/161 (53.42%), Query Frame = 0
Query:  116 VKEGEDATISNQGLLLYKDPIKLLDIVNIVGRFQTFDDVQNKKKDTGAMSDFLFRDTFKASGFKLENLRRSKFKGWPKGPDGQPALRDAFGG-DVKAVTRGMAKRELSESAMDAVFDSFVGSPLSIVADRFKVDNQLDKWRKDNTFDVKGFEQGLLVGRLL 275
            + + E  T+ N GLL Y + +KLLD+VN+VGRFQ +D V  +       +  L R+ FK      + +R+ KFK WPK   GQ      F   D     + +   ELSE A+DAVFD+F  +  S   +R K + Q  +WR+ + FDV+ FE  LL   L+
Sbjct:   71 MSDAESLTVKNNGLLKYGEDVKLLDVVNVVGRFQGWDGVWEQPPPGTFFASGLSRERFK------DKVRKEKFKSWPKDSSGQSVAAKLFPELDGPKGVKQVDSMELSEVALDAVFDTF--NSASSHTERRKAEEQFAQWRQGDVFDVEAFESNLLKANLI 223          
BLAST of mRNA_L-elsbetiae_contig4801.12682.1 vs. uniprot
Match: A0A7S0KA49_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KA49_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 7.890e-15
Identity = 73/225 (32.44%), Postives = 112/225 (49.78%), Query Frame = 0
Query:   91 GIIPYTIIASKNVLGEVIGFKAR----PVVKEGEDAT-----ISNQGLLLYKDPIKLLDIVNIVGRFQTFDDVQNKKKDTGAMSDFLFRDT----FKASGFKLENLRRSKFKGWPKGPDGQPALRDAFGG-DVKA-VTRGMAKRE--LSESAMDAVFDSFVGSPLSIVADRFKVDNQLDKWRKDNTFDVKGFEQGLLVGRLLFLFTIVSLIGLLLAGYGVFFVEP 298
            G+IP  I A+K +LG ++G +A      V K    A+     I N  LL  ++P+KL D+V IVGR +    V + K    A  D L        +   G   +N+R +KF GWP      P+  +  GG ++K+   R ++K+   + + A+DAVFD++     S +A   KVD QL  WR +N FD+  F    + GR +    I++ I + +  YG  FV P
Sbjct:   86 GLIPPAIAANKLMLGTILGQRAGGDDDSVAKVSTSASSVSPDIPNSKLLFAREPVKLADVVAIVGRIRDVQSVADWKNLPSAKRDNLIDPENPPMWLPRGMFKDNIRNAKFVGWPV----DPSTGEVVGGIELKSEFEREVSKKSYPIPDVALDAVFDTWAWG--SGIATPDKVDVQLQAWRSNNGFDLNKFASAAVAGRSVTGAAILTFITIQVMVYGCLFVAP 304          
BLAST of mRNA_L-elsbetiae_contig4801.12682.1 vs. uniprot
Match: A0A7S1BLB2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLB2_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 5.330e-8
Identity = 62/244 (25.41%), Postives = 114/244 (46.72%), Query Frame = 0
Query:   91 GIIPYTIIASKNVLGEVIGFKARPVVKEGEDA----------------------TISNQGLLLYKDPIKLLDIVNIVGRFQTFDDV-------QNKKKDTGAMS--DFLFRDTFKASGFKLENLRRSKFKGWPKGPDGQPALRDAFGGDVKAVTRGMAKR---ELSESAMDAVFDSF-VGSPLSIVADRFKVDNQLDKWRKDN-TFDVKGFEQGLLVGRLLFLFTIVSLIGLLLAGYGVFFVEP 298
            G+IP  I A+  ++  +    A P  +EG+ +                      T+S   LL   +P+KL+D++ ++GR    +DV         K  +  + +   +L R+T+K       N+R +K++GWP   DG P      GG+++       ++   E+S++A+D VFD++ +G+    VA   KV   L  + K N TFD+  F+   ++GR +    I+  + + +  +G  F+ P
Sbjct:  103 GLIPALISANTRIIESLTRKGAAPPKEEGDPSKSLDPYAALPISYVSDSGASGPTLSCSPLLFSGEPVKLVDVLAVIGRISDVNDVARWSDLPSTKLPNVSSNNPPQWLPRNTYKV------NIRAAKWRGWPVNADGSPI----GGGELQRSEEKRLRQKGAEISDAALDVVFDTWALGAG---VATPDKVSEALSSYLKSNGTFDLGKFQSAAVLGRAVTAAAILFFLVIQVIAFGTLFIAP 333          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4801.12682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K4C0_9PHAE5.540e-15679.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTS8_9STRA2.620e-4842.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2USE2_9STRA7.510e-2037.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0KA49_9STRA7.890e-1532.44Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S1BLB2_9STRA5.330e-825.41Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 297..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..296
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableTMHMMTMhelixcoord: 274..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4801contigL-elsbetiae_contig4801:6123..9904 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4801.12682.1mRNA_L-elsbetiae_contig4801.12682.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4801 6123..9904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4801.12682.1 ID=prot_L-elsbetiae_contig4801.12682.1|Name=mRNA_L-elsbetiae_contig4801.12682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=303bp
SLVGALLALAGGRSVNAFAMGGALRPAVGRGVFAGAPLTSGSLTRRPEQH
RGGAVSTSRGCARMLAGQEFATCSDDDFRAYIIGWTLVWSGIIPYTIIAS
KNVLGEVIGFKARPVVKEGEDATISNQGLLLYKDPIKLLDIVNIVGRFQT
FDDVQNKKKDTGAMSDFLFRDTFKASGFKLENLRRSKFKGWPKGPDGQPA
LRDAFGGDVKAVTRGMAKRELSESAMDAVFDSFVGSPLSIVADRFKVDNQ
LDKWRKDNTFDVKGFEQGLLVGRLLFLFTIVSLIGLLLAGYGVFFVEPLI
IR*
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