prot_L-elsbetiae_contig4798.12665.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4798.12665.1
Unique Nameprot_L-elsbetiae_contig4798.12665.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length436
Homology
BLAST of mRNA_L-elsbetiae_contig4798.12665.1 vs. uniprot
Match: D7FS82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS82_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 1.060e-119
Identity = 176/251 (70.12%), Postives = 202/251 (80.48%), Query Frame = 0
Query:   21 SASQFVTTDACIFTFSVGDLPNFQLPEAGPNSPGDVQLNEGNGIITRGSVDNDGKSNTMLMLMLLNGTLYGCNGESSAYFVGDDTWNTTYISNDGDELDIDVFFATFQNELWVRHLQPHMDPSLYEALNETVIRLNITCGEELEDTT---GCIEFTASFTEATPYNMTDAFEFEDECFHGFSSGAQVSTVQVHAASPVGPASSASLGSGHTLILAGKADEGLPWSEGFYANGSQKDDAFWGKWWSTINSRY 268
            SASQF TTD C FTFS G LPNF+LPEAGPNSPGDVQLN GN IITRG V+ D            NGTL+ CNGESSAY VGDDTWNTTYI NDGDEL++DVF+AT+QN+LWVRHLQPHMDPSLYEALN+T IRLNITC +    ++   GC+EFT +FTEATPYN T+ +EF D+C HGFSSG QV +V VHAASP+GP SSASLG G+ LILAGKAD+GLPWSEGF  +GS+KDD FW  WW+T++SRY
Sbjct:   33 SASQFTTTDGCNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDE-----------NGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEQVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSDWWATVDSRY 272          
BLAST of mRNA_L-elsbetiae_contig4798.12665.1 vs. uniprot
Match: D8LRK2_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK2_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 5.370e-118
Identity = 185/285 (64.91%), Postives = 219/285 (76.84%), Query Frame = 0
Query:   21 SASQFVTTDACIFTFSVGDLPNFQLPEAGPNSPGDVQLNEGNGIITRGSVDNDGKSNTMLMLMLLNGTLYGCNGESSAYFVGDDTWNTTYISNDGDELDIDVFFATFQNELWVRHLQPHMDPSLYEALNETVIRLNITCGEELEDTT---GCIEFTASFTEATPYNMTDAFEFEDECFHGFSSGAQVSTVQVHAASPVGPASSASLGSGHTLILAGKADEGLPWSEGFYANGSQKDDAFWGKWWSTINSRYNSLTGEDDGANHVEG-VESNGFFCPTGE-TTCGS 300
            SASQF TTDAC FTFS G LPNF+LPEAGPNSPGDVQLN GN IITRG V+ D            NGTL+ CNGESSAY VGDDTWNTTY+ NDGDEL++DVF+AT+QN+LWVRHLQPHMDPSLYEALN+T IRLNITC +    ++   GC+EFT +FTEATPYN T+ +EF D+C HGFSSG +V +V VHAASP+GP SSASLG G+ LILAGKAD+GLPWSEGF  +GS+KDD FW  WW+ ++SRY S    DD     +G V+++G +C + E  TC S
Sbjct:   19 SASQFTTTDACNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDE-----------NGTLHSCNGESSAYQVGDDTWNTTYVGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEKVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSNWWADVDSRYGSTEESDDPCTEYDGIVDADGVYCCSDEDNTCDS 292          
BLAST of mRNA_L-elsbetiae_contig4798.12665.1 vs. uniprot
Match: D7G672_ECTSI (WSC domain-containing protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G672_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 2.290e-117
Identity = 183/279 (65.59%), Postives = 216/279 (77.42%), Query Frame = 0
Query:   21 SASQFVTTDACIFTFSVGDLPNFQLPEAGPNSPGDVQLNEGNGIITRGSVDNDGKSNTMLMLMLLNGTLYGCNGESSAYFVGDDTWNTTYISNDGDELDIDVFFATFQNELWVRHLQPHMDPSLYEALNETVIRLNITCGEELEDTT---GCIEFTASFTEATPYNMTDAFEFEDECFHGFSSGAQVSTVQVHAASPVGPASSASLGSGHTLILAGKADEGLPWSEGFYANGSQKDDAFWGKWWSTINSRYNSLTGEDDGANHVEG-VESNGFFCPTGE 295
            SASQF TTDAC FTFS G LPNF+LPEAGPNSPGDVQLN GN IITRG V+ D            NGTL+ CNGESSAY VGDDTWNTTYI NDGDEL++DVF+AT+QN+LWVRHLQPHMDPSLYEALN+T IRLNITC +    ++   GC+EFT +FTEATPYN T+ +EF D+C HGFSSG +V +V VHAASP+GP SSASLG G+ LILAGKAD+GLPWSEGF  +GS+KDD FW  WW+ ++SRY S    DD     +G V+++G +C + E
Sbjct:   19 SASQFTTTDACNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDE-----------NGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEKVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSNWWAVVDSRYGSTEESDDPCTEHDGIVDADGVYCCSDE 286          
BLAST of mRNA_L-elsbetiae_contig4798.12665.1 vs. uniprot
Match: D7G7E4_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E4_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 4.450e-89
Identity = 142/220 (64.55%), Postives = 172/220 (78.18%), Query Frame = 0
Query:   86 NGTLYGCNGESSAYFVGDDTWNTTYISNDGDELDIDVFFATFQNELWVRHLQPHMDPSLYEALNETVIRLNITCGEELEDTT---GCIEFTASFTEATPYNMTDAFEFEDECFHGFSSGAQVSTVQVHAASPVGPASSASLGSGHTLILAGKADEGLPWSEGFYANGSQKDDAFWGKWWSTINSRYNSLTGEDDGANHVEG-VESNGFFCPTGE-TTCGS 300
            NGTL+ CNGESSAY VGDDTWNTTYI NDGD+L +DVF+AT+QN+LWVRHLQPHMDPSLYEALN+T IRLNITC +    ++   GC+EFT +FTEATPYN T+ +EF D+C HGFSSG QV +V VHAASP+GP SSASLG G+ LILAGKAD+G PWSEGF  +GS+KDD FW  WW+ ++SRY S    DD     +G V+++G +C   E +TC S
Sbjct:   13 NGTLHSCNGESSAYHVGDDTWNTTYIGNDGDKLGVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEQVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGPPWSEGFNEDGSRKDDEFWSDWWAVVDSRYGSTEESDDPCTEYDGIVDADGVYCCFDEDSTCDS 232          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4798.12665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FS82_ECTSI1.060e-11970.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRK2_ECTSI5.370e-11864.91WSC domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G672_ECTSI2.290e-11765.59WSC domain-containing protein n=3 Tax=Ectocarpus s... [more]
D7G7E4_ECTSI4.450e-8964.55WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..435
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.843

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4798contigL-elsbetiae_contig4798:9400..13281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4798.12665.1mRNA_L-elsbetiae_contig4798.12665.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4798 5582..13281 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4798.12665.1 ID=prot_L-elsbetiae_contig4798.12665.1|Name=mRNA_L-elsbetiae_contig4798.12665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=436bp
MVTNRALLSIALAPLLACCASASQFVTTDACIFTFSVGDLPNFQLPEAGP
NSPGDVQLNEGNGIITRGSVDNDGKSNTMLMLMLLNGTLYGCNGESSAYF
VGDDTWNTTYISNDGDELDIDVFFATFQNELWVRHLQPHMDPSLYEALNE
TVIRLNITCGEELEDTTGCIEFTASFTEATPYNMTDAFEFEDECFHGFSS
GAQVSTVQVHAASPVGPASSASLGSGHTLILAGKADEGLPWSEGFYANGS
QKDDAFWGKWWSTINSRYNSLTGEDDGANHVEGVESNGFFCPTGETTCGS
IPCGSYWQRGSGTETCPNEIEEQGFCCPATCGTCGGAGCGQRPGGSACCI
SVLQRNGPTCDERDIAPCILNAQAGDTCFNGVVGASHARVTCVVRAPGKM
KRRKRLHWHCIGVLGSQVRRVAFRLSDTRRRIPRS*
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