prot_L-elsbetiae_contig4795.12662.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4795.12662.1
Unique Nameprot_L-elsbetiae_contig4795.12662.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length150
Homology
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BLAST of mRNA_L-elsbetiae_contig4795.12662.1 vs. uniprot
Match: D8LUB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB9_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.680e-16
Identity = 49/115 (42.61%), Postives = 63/115 (54.78%), Query Frame = 0 
Query:    1 MSADGGKP-----------PPPRVGAFMPEEFCDEVYDNVDDAVADEMENLECRLRKTAPQPGATDQ---------------ASMKTCCDRVQKHAQKWFDRNTDIFDRYVKKNM 89
            MSA+GG+P           P P +G F  E FCDEVYD +DD++A+ M  +E  L + A +    DQ               AS+KTCCD VQ   Q+ FDRN DI DRY+KKN+
Sbjct:    1 MSAEGGEPXXXXXXXXXXXPHPLLGDFKTENFCDEVYDYMDDSLAEAMVKMEEELIQAAAKVKGADQGXXXXXXXXXXXDIEASIKTCCDNVQTRIQQEFDRNIDILDRYIKKNV 115
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4795.12662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUB9_ECTSI2.680e-1642.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4795contigL-elsbetiae_contig4795:643..1922 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4795.12662.1mRNA_L-elsbetiae_contig4795.12662.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4795 643..2088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4795.12662.1 ID=prot_L-elsbetiae_contig4795.12662.1|Name=mRNA_L-elsbetiae_contig4795.12662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp
MSADGGKPPPPRVGAFMPEEFCDEVYDNVDDAVADEMENLECRLRKTAPQ
PGATDQASMKTCCDRVQKHAQKWFDRNTDIFDRYVKKNMVVAAAREDAAA
AVAAAMAAAAGGGVNNGGCSARAGAAAGVTAPSQAALAAGAGGEVGEYLG
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