prot_L-elsbetiae_contig4792.12659.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4792.12659.1
Unique Nameprot_L-elsbetiae_contig4792.12659.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length241
Homology
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: D7FN93_ECTSI (Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN93_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 3.810e-111
Identity = 155/201 (77.11%), Postives = 179/201 (89.05%), Query Frame = 0
Query:   35 HDAFVEELLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVKKALLSL 235
            H AFVE+LL LTGDPLE++GGR+VVFRG+PSA LML+GEAPGAEED+LGVPFVGRSGQLLDD+LRAVG DP+ +VY+SNIVRRRPI+NR PTPEEMDFYLP LLEEI LVDP VIV LGASSTKALLP+E RGIT+ARG+W DP ALA++HGG LA  L+MPWFHPSYL+RNS ERSR+EGGVRWH RNDL+EV+  +  +
Sbjct:  139 HRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLADMLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGI 339          
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: A0A835YMS9_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS9_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.600e-67
Identity = 122/230 (53.04%), Postives = 148/230 (64.35%), Query Frame = 0
Query:   16 GPATQRSKVPA--------VYSSAPLF--HDAFVEELLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVKKALLSL 235
            GP T R  + A        V    P F  H      LLALTGDPLE  GGRIVV+RG+P A+LM+VGEAPGA ED+ G PFVGRSGQLLD IL+A G DP+ D+Y+SNIVRRRP  NR PT  E+ +Y P LLEEIRLV+P +I+T G  S +A+L  E+RGITK RG+W  P     +     A    MPWFHPSYL+RN    ++ EGG +W T  D QEV++    L
Sbjct:   31 GPCTSRLHMAAGAKGASAAVQQKIPQFKDHAEMTAALLALTGDPLEPAGGRIVVYRGDPQAKLMVVGEAPGAMEDETGKPFVGRSGQLLDAILKAAGFDPETDLYVSNIVRRRPPENRDPTTAEIAYYRPWLLEEIRLVNPAIIITTGRWSMRAVLN-ERRGITKVRGQWYAPGTTPDLPAATWA----MPWFHPSYLLRNP---TKDEGGPKWLTWVDAQEVRRKYDEL 252          
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: A0A3M1EZS2_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EZS2_9CHLR)

HSP 1 Score: 202 bits (513), Expect = 8.520e-62
Identity = 105/195 (53.85%), Postives = 134/195 (68.72%), Query Frame = 0
Query:   35 HDAFVEELLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVK 229
            H A VE L  LTGDPLE  GG +V++RGNP+A+LM++GE PGAEED+L  PFVGRSGQLLD ILRAV  DP+ DVYI+N+V+RRP  NR PTPEE++FY P L EEIRLVDP +I+  G  +   +L  EKRGITK RG+W +             G+ +MP FHP+YL+RN     R  G  +  T +D++ V+
Sbjct:   30 HQALVEALENLTGDPLEPWGGNMVIYRGNPAAKLMVIGEGPGAEEDRLRKPFVGRSGQLLDKILRAVHFDPETDVYITNVVKRRPPENRDPTPEEINFYAPYLFEEIRLVDPKIIMLTGRYAMLTILG-EKRGITKVRGQWFER-----------GGRWIMPMFHPAYLLRNPQ---RTPGSPKALTWDDIRAVR 209          
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: A0A7C3BN30_9CHLR (Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BN30_9CHLR)

HSP 1 Score: 196 bits (498), Expect = 8.400e-60
Identity = 99/195 (50.77%), Postives = 130/195 (66.67%), Query Frame = 0
Query:   35 HDAFVEELLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVK 229
            H   VE L  L GDPLEQ GG IV++RGNP+A+LM++GE PGA ED+L  PFVGRSG+LLD IL AV  +P+ DVYISN+VRRRP  NR P P+E+ FY P L EEIRL+DP +I+ +G  +   +L  EKRGITK RG+W   +           G+ +MP FHP+YL+RN  +R      + W   +D++ V+
Sbjct:   11 HQELVEALNNLGGDPLEQWGGNIVIYRGNPAAKLMIIGEGPGANEDRLRKPFVGRSGKLLDQILSAVNFNPEQDVYISNVVRRRPPKNRDPLPKEIAFYAPYLFEEIRLLDPKIILLIGRHAMMTILK-EKRGITKVRGQWFQKD-----------GRWIMPMFHPAYLLRNPGKRPGSPKSLTW---DDIRAVR 190          
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: A0A7S2V4W6_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4W6_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.320e-59
Identity = 113/214 (52.80%), Postives = 138/214 (64.49%), Query Frame = 0
Query:   24 VPAVYSSAPLFHDAFVEELLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLD--PDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVKKALLSL 235
             P V+S     +D F +   ++ GDPL+  GG +VVFRGNP  R+M+VGEAPG EEDK  +PFVG++GQLL+ +L   G D  P  +VYI+N+V+RRP NNR PTPEE+ FYLP L EEIRLVDPD+IV  G+ S KALL  E RGITK RG W D +           GK  MP FHPSYL+RN   RS+ +   RW T NDL  V K    L
Sbjct:   52 TPPVFSFGS--YDEFFQVTQSMEGDPLDG-GGSVVVFRGNPRGRVMVVGEAPGEEEDKQKLPFVGKAGQLLEKMLTEAGFDTGPQGEVYITNLVKRRPPNNRNPTPEEVSFYLPLLQEEIRLVDPDIIVCAGSFSMKALLE-EDRGITKVRGTWYDYK-----------GKKCMPIFHPSYLLRN---RSKEKNQPRWLTWNDLLNVFKEYQLL 247          
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: C1FF23_MICCC (Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FF23_MICCC)

HSP 1 Score: 196 bits (497), Expect = 5.480e-59
Identity = 99/200 (49.50%), Postives = 132/200 (66.00%), Query Frame = 0
Query:   36 DAFVEELLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVKKALLSL 235
            D     L +LTGDPLE +GGRIV FRG+ +AR+M++GEAPGAEEDKLGVPFVGR+G+LLD+I  +V L  D   Y++N+V+RRP+NNR PT  E+++Y   L EEIRL+DP +IV  G  S + LL     GITK RG W D +           G++VMP FHPSYL+RN  +       + W   +D++EVK+ +  L
Sbjct:   56 DELAHHLRSLTGDPLESDGGRIVTFRGDTNARVMIIGEAPGAEEDKLGVPFVGRAGKLLDEIFASVTLSTDRHCYVTNVVKRRPLNNRDPTAREIEWYRGYLREEIRLLDPAIIVCTGRHSMRTLLGKNCEGITKIRGRWFDVD-----------GRVVMPMFHPSYLLRNPQKTPGSPKALTW---DDIREVKRKVDEL 241          
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: W7TG57_9STRA (Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG57_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.410e-58
Identity = 101/201 (50.25%), Postives = 135/201 (67.16%), Query Frame = 0
Query:   35 HDAFVEELLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVKKALLSL 235
            H  FV+ L  L GDPL+ EG R+V+ RGN  A++M++GEAPG  ED  G PFVGR+G+LLD IL +VGLD +  VYI+N+V RRP NNR P+  E+ +YLP L+E +RLVDP +I+  GA + KALLP EK+GIT+ RG+W +     +        +LVMP FHPSYL+RN    SR+  G +W T  D+Q V++    L
Sbjct:   83 HADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNP---SRKVEGPKWLTWQDIQAVRRRYDEL 279          
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: A0A7S2S1J0_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1J0_9STRA)

HSP 1 Score: 192 bits (487), Expect = 8.850e-57
Identity = 99/198 (50.00%), Postives = 131/198 (66.16%), Query Frame = 0
Query:   42 LLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVKKALLSLPPPH 239
            L  L+GDPLE+ GGR+V +RGNP A++++VGEAPGA ED+LGVP+VGR+G+LLD IL A G D + DVY +N+V+RRP  NR PT  E+ +Y P LLEE+RLVDP ++V  G  S + LL   K+GITK RG+W     L ++HG        MP FHPSYL+RN    SR+ G  +  T  D QE+++        H
Sbjct:   35 LAGLSGDPLEEFGGRVVHYRGNPGAKVVVVGEAPGATEDELGVPYVGRAGKLLDQILTAAGFDVEEDVYFTNVVKRRPPENRDPTAAELRYYSPLLLEELRLVDPWIVVCTGRFSMRTLLDV-KQGITKVRGQWFPLPGLPEIHG--------MPMFHPSYLLRNP---SRKAGSPKSLTWVDAQEIRRKFQECEAAH 220          
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: A0A1W9W486_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineaceae bacterium 4572_78 TaxID=1972460 RepID=A0A1W9W486_9CHLR)

HSP 1 Score: 187 bits (474), Expect = 4.460e-56
Identity = 101/210 (48.10%), Postives = 133/210 (63.33%), Query Frame = 0
Query:   20 QRSKVPAVYSSAPLFHDAFVEELLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVK 229
            Q S +  VY +    H A VE L  LT DPLE  G  +V++RG P A LM++GEAPGAEEDK+G PFVGRSGQLLD IL+AV  + + D+YI+N ++RRP NNR P  EE+++Y P L EEIRLVDP +I+  G  +   +L  EKRGITK RG+WV+             G+ VMP FHP+YL+RN  +       + W    D++ V+
Sbjct:    4 QISLMQTVYPT----HQALVETLKNLTDDPLESTGSNMVIYRGYPKADLMIIGEAPGAEEDKIGKPFVGRSGQLLDKILQAVHFNIETDIYITNTLKRRPPNNRNPKQEELEYYFPFLAEEIRLVDPKIILLAGKYAMLTILQ-EKRGITKVRGQWVEQ-----------GGRWVMPIFHPAYLLRNPRKTPGSPKALMWE---DIRAVR 194          
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Match: A0A7C3CIK3_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3CIK3_9CHLR)

HSP 1 Score: 181 bits (460), Expect = 6.780e-54
Identity = 98/201 (48.76%), Postives = 126/201 (62.69%), Query Frame = 0
Query:   35 HDAFVEELLALTGDPLEQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRAVGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIVTLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHPSYLIRNSNERSRREGGVRWHTRNDLQEVKKALLSL 235
            H A +  + ALT DPL   G R+V++RGNP A L++VGE PGA ED+LG P+VGRSGQLLD IL A G D  + VY++N V RRP +NR PT  E+DFYLP LLE IR+VDP VI+  G  S + +L  EKRGITK RG W       Q H      + +MP FHP+YL+RN +    +   + W    D+Q V++    L
Sbjct:   15 HAAIIRAMEALTDDPLYPTGNRMVIYRGNPQADLLIVGEGPGANEDRLGKPYVGRSGQLLDKILEAAGFDSQNGVYVTNTVFRRPPDNRDPTQAELDFYLPYLLELIRIVDPKVILLTGRFSMRQILG-EKRGITKVRGTWY------QRHD-----RWIMPMFHPAYLLRNPSRAVGKPKSLTWQ---DIQAVRRKYDEL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4792.12659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN93_ECTSI3.810e-11177.11Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus s... [more]
A0A835YMS9_9STRA1.600e-6753.04Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema mi... [more]
A0A3M1EZS2_9CHLR8.520e-6253.85Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae ... [more]
A0A7C3BN30_9CHLR8.400e-6050.77Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi ... [more]
A0A7S2V4W6_9STRA1.320e-5952.80Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa j... [more]
C1FF23_MICCC5.480e-5949.50Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas c... [more]
W7TG57_9STRA2.410e-5850.25Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidac... [more]
A0A7S2S1J0_9STRA8.850e-5750.00Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromul... [more]
A0A1W9W486_9CHLR4.460e-5648.10Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineac... [more]
A0A7C3CIK3_9CHLR6.780e-5448.76Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00987UDG_2_acoord: 59..226
e-value: 7.3E-29
score: 111.9
NoneNo IPR availablePANTHERPTHR33693FAMILY NOT NAMEDcoord: 41..232
IPR005122Uracil-DNA glycosylase-likeSMARTSM00986UDG_2coord: 59..226
e-value: 7.3E-29
score: 111.9
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 61..210
e-value: 1.3E-36
score: 125.9
IPR005273Uracil-DNA glycosylase family 4TIGRFAMTIGR00758TIGR00758coord: 49..213
e-value: 1.2E-40
score: 137.0
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 33..233
e-value: 2.2E-52
score: 179.2
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 37..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4792contigL-elsbetiae_contig4792:713..12736 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4792.12659.1mRNA_L-elsbetiae_contig4792.12659.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4792 713..12737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4792.12659.1 ID=prot_L-elsbetiae_contig4792.12659.1|Name=mRNA_L-elsbetiae_contig4792.12659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp
PSWRSSRSRPCFRGSGPATQRSKVPAVYSSAPLFHDAFVEELLALTGDPL
EQEGGRIVVFRGNPSARLMLVGEAPGAEEDKLGVPFVGRSGQLLDDILRA
VGLDPDHDVYISNIVRRRPINNRAPTPEEMDFYLPALLEEIRLVDPDVIV
TLGASSTKALLPFEKRGITKARGEWVDPEALAQVHGGALAGKLVMPWFHP
SYLIRNSNERSRREGGVRWHTRNDLQEVKKALLSLPPPHSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005122Uracil-DNA_glycosylase-like
IPR005273Ura-DNA_glyco_family4
IPR036895Uracil-DNA_glycosylase-like_sf