prot_L-elsbetiae_contig4791.12658.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4791.12658.1
Unique Nameprot_L-elsbetiae_contig4791.12658.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length464
Homology
BLAST of mRNA_L-elsbetiae_contig4791.12658.1 vs. uniprot
Match: A0A6H5JAE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAE9_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.060e-37
Identity = 235/526 (44.68%), Postives = 260/526 (49.43%), Query Frame = 0
Query:    1 MAAAVDWANSL----EITSGSFQVAEVAPAMRRAFEIEVAFEITGGGTVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EARAIVAATAGKLRDVLEEADMHRQKAASLERALEAVLQECDDLAEAAAAAG----------------------------------WPPA--------GTEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQVTEAGESASDLSESESDTIEDXXXXXXXXXXXXXXXXXXAVKGXXXXDVRXXXXXXXXXXXXXXXXXXXXPSLLLGVDDADXXXXXXXXXXXXXXXXXXXXXXDSPDGKEEGEGGP----GGEGPPGAAAXXXXXXXXXXXXXXXXXXXVTVG-----------------GTGQGEGAGEREPSLLEFENGTADGEANNPTSAAIGNVDKSTGGDGDGSXXXSDESDDGEEAAV-ERLAAWLLGLKIRKADAGRYARSLVADGFDSEEALRGVREEELVQYGMKKGHARFVVTSL 457
            MAAAVDWAN L    EITSGSFQVAEV P MR+AFE EV FEITGGGT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EARAIVAATA +LR+V EEADMHRQKAASLERALEAVL+ECDDL +AA A G                                    P+        G ++                                +  E A   S S S                         +                             S+LLGVDD                        D   G  +    P    G +GP  A +     XXXXXXXXXXXXX                       + QGE  G    SLL+F + T D    + TSAA+ N    TGG        +D ++DG EA V +RLA WL GLKIR+ DA RYA  LVADGFDSEEALRGVREEEL+QYGMKKGHAR VV  L
Sbjct:   21 MAAAVDWANGLTLDREITSGSFQVAEVVPDMRKAFEKEVLFEITGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARAIVAATANRLREVQEEADMHRQKAASLERALEAVLKECDDLVKAAEAGGARGLAEVSATGEEXXXXXXXXXXXXXXXXXXXXXXXPSMLLGVDSPGADSDASPPLLLLGEGDPSQQATGEAEPSLLNFDGNDGEEEAHPTSPSPSAGTSAPACGEPEPAGGTEGAESSGSEEGSFCGEDDEALDEEAQLDSSSEQSAAEASMLLGVDD---------------------DAADGDSGNRDAASAPSLLLGADGPDAAGSSEASAXXXXXXXXXXXXXAAEAXXXXXXXXXXXXXRSRQQSSPQGETGGAGS-SLLDFGDETGD---QHTTSAAVAN---GTGG--------NDGAEDGGEAVVVQRLATWLSGLKIREPDASRYAGRLVADGFDSEEALRGVREEELLQYGMKKGHARLVVRLL 510          
BLAST of mRNA_L-elsbetiae_contig4791.12658.1 vs. uniprot
Match: D8LG39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG39_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 7.000e-31
Identity = 271/519 (52.22%), Postives = 294/519 (56.65%), Query Frame = 0
Query:    1 MAAAVDWANSL----EITSGSFQVAEVAPAMRRAFEIEVAFEITGGGTVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EARAIVAATAGKLRDVLEEADMHRQKAASLERALEAVLQECDDLAEAAAAAGW--------------------------------------------PPAGTEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQVTEAGESASDLSESESDTIEDXXXXXXXXXXXXXXXXXXAVKGXXXXDVRXXXXXXXXXXXXXXXXXXXXPSLLLGVDDADXXXXXXXXXXXXXXXXXXXXXXDSPDGKEEGEGGPGGEGPPGAAAXXXXXXXXXXXXXXXXXXXVTVGG-------------TGQGEGAGEREPSLLEFENGTADGEANNPTSAAIGNVDKSTGGDGDGSXXXSDESDDGEEAAVERLAAWLLGLKIRKADAGRYARSLVADGFDSEEALRGVREEELVQYGMKKGHARFVVTSL 457
            MAAAVDWAN L    EITSGSFQVAEV P MR+AFE EV FEITGGGT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  EARA+VAATA +LR+  +EADMHRQKAASLERALEAVL+ECDD+ +AA AAG                                              PA   +  XXXXXXXXXXXXXXXXXXXXXXXX      +  E A   S S S                         +    X   XX                  PS +LGV    XXXXXXXXXXXXXXXXXXXXXX                   GA+A XXXXXXXXXXXXXX     +                + QGE AG    SLL+F + T D    + T+A+  N          G+          E A VERLAAWL GLKIR+ DA RYA  LVADGFDSEEALRGVREEEL+QYGMKKGHAR VV  L
Sbjct:  392 MAAAVDWANGLTLDREITSGSFQVAEVVPDMRKAFEKEVLFEITGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEARAMVAATANRLREAQQEADMHRQKAASLERALEAVLKECDDIVKAAEAAGARGLAEVSATGEEXXXXXXXXXXGCPVSTAAADAAAAPSMLLGVDSPAAGSSDAXXXXXXXXXXXXXXXXXXXXXXXXLNFDGGDGEEEARPTSPSPSAGAGAPACGEPEPAEGTEGAESSGSEEGSSXXXXXXASDEEAQLDSSSEQSAAEPSTILGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------GASAIXXXXXXXXXXXXXXAEASASXXXXXXXXXXQSRQQPSPQGE-AGGAGSSLLDFGDNTGD---QHSTTASAAN----------GTGGNXXXXXXXEAAVVERLAAWLSGLKIREPDASRYAGRLVADGFDSEEALRGVREEELLQYGMKKGHARLVVRLL 884          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4791.12658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAE9_9PHAE1.060e-3744.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG39_ECTSI7.000e-3152.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 196..223
NoneNo IPR availableCOILSCoilCoilcoord: 107..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4791contigL-elsbetiae_contig4791:429..6152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4791.12658.1mRNA_L-elsbetiae_contig4791.12658.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4791 408..6563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4791.12658.1 ID=prot_L-elsbetiae_contig4791.12658.1|Name=mRNA_L-elsbetiae_contig4791.12658.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=464bp
MAAAVDWANSLEITSGSFQVAEVAPAMRRAFEIEVAFEITGGGTVSEEEE
EDKHDPQWSRYRRQQAAARREVGGGGGRKRRGAWTAAAQRRDEDEARAIV
AATAGKLRDVLEEADMHRQKAASLERALEAVLQECDDLAEAAAAAGWPPA
GTEAEAGAGAGAGAGAGAGAGAGAGAGAGAGAQQVTEAGESASDLSESES
DTIEDEEEEADEEGEEEEEDAEAAVKGGGSGDVRQQGEEESSSAAADAAA
AAAAPSLLLGVDDADDAADAAGTPSLLLGVDDPSQPADSPDGKEEGEGGP
GGEGPPGAAAPSLLLGVGDPPQEPTPPCGVTVGGTGQGEGAGEREPSLLE
FENGTADGEANNPTSAAIGNVDKSTGGDGDGSGGGSDESDDGEEAAVERL
AAWLLGLKIRKADAGRYARSLVADGFDSEEALRGVREEELVQYGMKKGHA
RFVVTSLAAGFGL*
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