prot_L-elsbetiae_contig479.12656.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig479.12656.1
Unique Nameprot_L-elsbetiae_contig479.12656.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length126
Homology
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: D7G0G4_ECTSI (ATP binding / ATP-dependent helicase/ DNA binding / DNA-directed DNA polymerase/ helicase/ nucleic a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0G4_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 2.660e-45
Identity = 91/126 (72.22%), Postives = 94/126 (74.60%), Query Frame = 0
Query:    1 LKLSTYAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGGNLVYSAPTSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            LKL TY IPE+LVESYAK                             SAPTSGGKTLVAELLLLRALLKH GTMALLVVPYVALALEKRDYLRDVWSPLQLN+QAYHGGEGGDGS+MEGVNVAICT
Sbjct:  717 LKLGTYKIPEQLVESYAK-----------------------------SAPTSGGKTLVAELLLLRALLKHSGTMALLVVPYVALALEKRDYLRDVWSPLQLNIQAYHGGEGGDGSDMEGVNVAICT 813          
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: W7TPK8_9STRA (Dna polymerase theta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPK8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.940e-29
Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = 0
Query:    6 YAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPL-EGGNLVYSAPTSGGKTLVAELLLLRALLKH-DGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            + IPE +V SY + G+R LF WQ  CL    G+ L EG NLVYSAPTSGGKTLVAELL+LRAL    +G  AL VVP+VALA EK  Y R VW+ + L V+A+H  +  D +  E V+VA+CT
Sbjct:  577 WGIPEVIVRSYEELGVRRLFPWQVACLEAGQGRVLREGRNLVYSAPTSGGKTLVAELLMLRALTHAVEGGTALFVVPFVALAEEKAGYFRRVWAGVDLGVKAFHS-DAVDATLSEDVHVAVCT 698          
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: A0A7J6KK66_PERCH (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6KK66_PERCH)

HSP 1 Score: 104 bits (259), Expect = 4.250e-26
Identity = 53/127 (41.73%), Postives = 82/127 (64.57%), Query Frame = 0
Query:    1 LKLSTYAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGG-NLVYSAPTSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            + +S++ + + LV  Y  RG+  L++WQ+ CL +     L+G  NL+Y APTSGGKTLV+E+++LR L   DG  AL V+PY+++  EK  Y + +  P Q  VQA++GG  G+   ME  ++A+CT
Sbjct:    1 MDISSFGMADSLVSVYRTRGVNQLYQWQSECLSLPG--VLDGNRNLIYCAPTSGGKTLVSEIVMLRRL-AGDGRRALFVLPYISVVSEKEAYFQSLCRPAQYKVQAFYGGSSGNFLAMERYDIAVCT 124          
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: A0A482RAU0_9ARCH (DEAD/DEAH box helicase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RAU0_9ARCH)

HSP 1 Score: 108 bits (271), Expect = 3.330e-25
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 0
Query:    8 IPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGGNLVYSAPTSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            +P  +V +YA   +  L  WQA CL +D   PL GGNLVY APTSGGKTLVAELL+LR LL     + L +VP+V+L +EK  +L+ VW  L L +Q ++   GG  + +  V+VA+CT
Sbjct:    1 VPPAVVAAYAAARVHTLHAWQAECLAIDACAPLLGGNLVYCAPTSGGKTLVAELLMLRTLLLRRRKV-LFIVPFVSLCVEKAGHLQRVWRALGLRIQGFYNNRGG--ASLHNVDVAVCT 116          
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: A0A7J6NM18_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NM18_PEROL)

HSP 1 Score: 107 bits (266), Expect = 1.980e-24
Identity = 55/127 (43.31%), Postives = 81/127 (63.78%), Query Frame = 0
Query:    1 LKLSTYAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGG-NLVYSAPTSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            + + ++ + E LV  Y  RG+  L+ WQ+ CL +     LEG  NL+Y APTSGGKTLV+E+++LR L   DG  AL V+PY+++  EK  YL+ +  P Q  VQA++GG  G+   ME  ++A+CT
Sbjct:    1 MDIGSFGLKESLVSVYRTRGVNQLYEWQSECLSLPGA--LEGNRNLIYCAPTSGGKTLVSEIVMLRRL-AGDGRRALFVLPYISVVSEKEAYLQSLCRPAQYKVQAFYGGSSGNFLAMERYDIAVCT 124          
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: UPI001CE11051 (DNA polymerase theta isoform X1 n=7 Tax=Siniperca chuatsi TaxID=119488 RepID=UPI001CE11051)

HSP 1 Score: 107 bits (266), Expect = 2.100e-24
Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    1 LKLSTYAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGGNLVYSAPTSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            L LS++ +P+ ++E Y K G+  +F WQA CL V  G+ L+GGNLVYSAPTS GKTLV+ELL+L+ +L+   T AL ++P+V++A EK  YL+ V+    + V+ Y G     G     ++VA+CT
Sbjct:  311 LLLSSWGLPKPVLERYQKHGVTHMFEWQAQCLTV--GQVLQGGNLVYSAPTSAGKTLVSELLMLKRVLETK-TKALFILPFVSVAKEKMHYLQSVFEEAGVRVEGYMGSTSAAGG-FTALDVAVCT 432          
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: UPI001CD8693B (DNA polymerase theta isoform X1 n=3 Tax=Solea senegalensis TaxID=28829 RepID=UPI001CD8693B)

HSP 1 Score: 106 bits (264), Expect = 3.910e-24
Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    1 LKLSTYAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGGNLVYSAPTSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            L LS++ +P+ ++E Y K G+  +F WQA CL V  G+ L+GGNLVYSAPTS GKTLV+ELLLL+ +L+     AL ++P+V++A EK  YL+ V+    + V+ Y G     G     ++VA+CT
Sbjct:  299 LLLSSWGLPKPILERYQKHGVTHMFEWQAQCLTV--GRVLQGGNLVYSAPTSAGKTLVSELLLLKRVLETK-RKALFILPFVSVAKEKMHYLQSVFEEAGVRVEGYMGSTAAAGG-FAALDVAVCT 420          
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: UPI001BE76CE9 (DNA polymerase theta n=1 Tax=Chelmon rostratus TaxID=109905 RepID=UPI001BE76CE9)

HSP 1 Score: 106 bits (264), Expect = 3.910e-24
Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    1 LKLSTYAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGGNLVYSAPTSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            L LS++ +P+ ++E Y K G+  +F WQA CL V  G+ L+GGNLVYSAPTS GKTLV+ELL+L+ +L+     ALL++P+V++A EK  YL+ V+    + V+ Y G     G     ++VA+CT
Sbjct:  296 LLLSSWGLPKPVLERYQKHGVTHMFEWQAQCLTV--GQVLQGGNLVYSAPTSAGKTLVSELLMLKRVLETK-RKALLILPFVSVAKEKMHYLQSVFEEAGVRVEGYMGSTSAAGG-FTALDVAVCT 417          
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: A0A1A8A6I6_NOTFU (Polymerase (DNA directed), theta n=3 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A8A6I6_NOTFU)

HSP 1 Score: 105 bits (263), Expect = 5.070e-24
Identity = 56/126 (44.44%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    1 LKLSTYAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGGNLVYSAPTSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            L LS++ +P+ ++E Y K G+  +F WQA CL V  G+ L+GGNLVYSAPTS GKTLV+ELL+L+ +L+     AL ++P+V++A EK  YL+ ++    + V+ Y G     G   E ++VA+CT
Sbjct:  307 LLLSSWGLPKPVLERYQKHGVTQMFEWQAQCLTV--GRVLQGGNLVYSAPTSAGKTLVSELLILKRVLETR-RKALFILPFVSVAKEKMHYLQSIFEEAGIRVEGYMGSTSAAGGFSE-LDVAVCT 428          
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Match: A0A437DPB1_ORYJA (Uncharacterized protein n=1 Tax=Oryzias javanicus TaxID=123683 RepID=A0A437DPB1_ORYJA)

HSP 1 Score: 105 bits (262), Expect = 6.880e-24
Identity = 56/126 (44.44%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    1 LKLSTYAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGGNLVYSAPTSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQLNVQAYHGGEGGDGSEMEGVNVAICT 126
            L LS++ +P  ++E Y K G+  +F WQA CL V  G+ L+GGNLVYSAPTS GKTLV+ELL+L+ +L+     AL ++P+V++A EK  YL+ V+  + + V+ Y G     G     ++VA+CT
Sbjct:  289 LLLSSWGLPRPVLEQYQKHGVTQMFEWQAQCLTV--GQVLQGGNLVYSAPTSAGKTLVSELLILKRVLETK-RKALFILPFVSVAKEKMQYLQSVFQEVGVRVEGYMGSTSAAGG-FSTLDVAVCT 410          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig479.12656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0G4_ECTSI2.660e-4572.22ATP binding / ATP-dependent helicase/ DNA binding ... [more]
W7TPK8_9STRA3.940e-2955.28Dna polymerase theta n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7J6KK66_PERCH4.250e-2641.73Helicase ATP-binding domain-containing protein (Fr... [more]
A0A482RAU0_9ARCH3.330e-2547.90DEAD/DEAH box helicase (Fragment) n=1 Tax=archaeon... [more]
A0A7J6NM18_PEROL1.980e-2443.31Uncharacterized protein n=2 Tax=Perkinsus olseni T... [more]
UPI001CE110512.100e-2445.24DNA polymerase theta isoform X1 n=7 Tax=Siniperca ... [more]
UPI001CD8693B3.910e-2445.24DNA polymerase theta isoform X1 n=3 Tax=Solea sene... [more]
UPI001BE76CE93.910e-2445.24DNA polymerase theta n=1 Tax=Chelmon rostratus Tax... [more]
A0A1A8A6I6_NOTFU5.070e-2444.44Polymerase (DNA directed), theta n=3 Tax=Nothobran... [more]
A0A437DPB1_ORYJA6.880e-2444.44Uncharacterized protein n=1 Tax=Oryzias javanicus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 8..126
e-value: 2.1E-23
score: 84.5
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..126
NoneNo IPR availablePANTHERPTHR24031:SF529coord: 1..126
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 40..110
e-value: 4.9E-8
score: 32.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig479contigL-elsbetiae_contig479:36220..38594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig479.12656.1mRNA_L-elsbetiae_contig479.12656.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig479 36220..38595 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig479.12656.1 ID=prot_L-elsbetiae_contig479.12656.1|Name=mRNA_L-elsbetiae_contig479.12656.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
LKLSTYAIPEKLVESYAKRGIRGLFRWQAHCLRVDDGKPLEGGNLVYSAP
TSGGKTLVAELLLLRALLKHDGTMALLVVPYVALALEKRDYLRDVWSPLQ
LNVQAYHGGEGGDGSEMEGVNVAICT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase