prot_L-elsbetiae_contig479.12653.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig479.12653.1
Unique Nameprot_L-elsbetiae_contig479.12653.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length136
Homology
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: D7G0G3_ECTSI (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G3_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 6.320e-48
Identity = 100/141 (70.92%), Postives = 106/141 (75.18%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFAPGERRATSTSAGVPDTDAPEANEAG--GSADGMDVDNSGXXXXXXXXXXXXXXXXXXXRNAXXXKEAQEAVGAEIKEVNSDEE-DGGEESRPAAKKSKPD--SAANGHSPAGRGR 136
            MNLT+RFYPHVHNMDGFFVAKLKKFAPGER+A ST AGVPD DAPEANEAG  G+AD MDVD SG                   R+A    +AQEAVGAEIKEVNSDEE DGGEESRPAAKKSKPD  +AANGHS  GRGR
Sbjct:   41 MNLTRRFYPHVHNMDGFFVAKLKKFAPGERKAVSTGAGVPDKDAPEANEAGAAGAADEMDVDFSGSDEDEDSKTKRKRAKKEAKRDAKNNAKAQEAVGAEIKEVNSDEEEDGGEESRPAAKKSKPDPTAAANGHSTPGRGR 181          
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: A0A6H5JZZ2_9PHAE (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ2_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 5.420e-36
Identity = 90/140 (64.29%), Postives = 97/140 (69.29%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFAPGERRATSTSAGVPDTDAPEANEAG--GSADGMDVDNSGXXXXXXXXXXXXXXXXXXXRNAXXXKEAQEAVGAEIKEVNSDEEDGGEE-SRPAAKKSKPD--SAANGHSPAGRG 135
            MNLT+RFYPHVHNMDGFFVAKLKKFAPGER+A ST AGVPD DAPEANEAG  G+A+ MDVD S                   X +A    +AQEAVGAEIKEVNSDE       SRPAAKKSKPD  + ANGHS  GRG
Sbjct:  635 MNLTRRFYPHVHNMDGFFVAKLKKFAPGERKAVSTGAGVPDKDAPEANEAGAVGAANEMDVDYSASDEDEDSKTKRKRAKKEAXXDAKNNAKAQEAVGAEIKEVNSDEXXXXXXXSRPAAKKSKPDPTATANGHSTPGRG 774          
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: A0A836CI73_9STRA (Ribosomal RNA methyltransferase nop2like protein put n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI73_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.570e-8
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFAPGERRA 32
            ++LT+RFYPHVHNMDGFFVAKLKKFA GER++
Sbjct:  535 LSLTRRFYPHVHNMDGFFVAKLKKFANGERKS 566          
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: A0A7S3IWF1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3IWF1_9SPIT)

HSP 1 Score: 59.7 bits (143), Expect = 9.480e-8
Identity = 26/36 (72.22%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFAPGERRATSTS 36
            MNL++R YPHVHNMDGFFVAKLKKFA GE+   + S
Sbjct:  323 MNLSRRIYPHVHNMDGFFVAKLKKFANGEKSVEAVS 358          
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: A0A078AFW0_STYLE (Ribosomal rna methyltransferase nop2-like n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AFW0_STYLE)

HSP 1 Score: 59.3 bits (142), Expect = 1.370e-7
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFAPGERRA 32
            +NLT+R YPH HNMDGFFVAKLKKFA GE+ A
Sbjct:  450 LNLTRRIYPHTHNMDGFFVAKLKKFANGEKNA 481          
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: UPI0004407439 (NOL1/NOP2/sun family RNA met n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004407439)

HSP 1 Score: 57.4 bits (137), Expect = 5.880e-7
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFAP---GERRATSTSAGVPDTDAPEANEAGGSADGMDVD 60
            + LT+RFYPHVHNMDGFFVAKLK   P    ++R T T +G  + +  EA     ++D MDVD
Sbjct:  323 VKLTRRFYPHVHNMDGFFVAKLKVGRPQKGAQKRTTETESGKKNVEPVEA-----ASDAMDVD 380          
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: T2MG92_HYDVU (Putative ribosomal RNA methyltransferase NOP2 (Fragment) n=4 Tax=Hydra vulgaris TaxID=6087 RepID=T2MG92_HYDVU)

HSP 1 Score: 57.4 bits (137), Expect = 6.470e-7
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFA 26
            MNLT+RFYPH HNMDGFFVAKLKKFA
Sbjct:  567 MNLTRRFYPHTHNMDGFFVAKLKKFA 592          
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: M4BNJ1_HYAAE (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNJ1_HYAAE)

HSP 1 Score: 57.0 bits (136), Expect = 8.580e-7
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFA---PGERRATSTSAGVPDTDAPEAN 48
            M LT+RFYPHVHNMDGF+VAKLKK+A   P E +    +    + DA EAN
Sbjct:  493 MQLTRRFYPHVHNMDGFYVAKLKKYANTMPSEEKDAKKTIDELEEDAEEAN 543          
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: J9IAR9_9SPIT (Ribosomal RNA methyltransferase nop2-like protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IAR9_9SPIT)

HSP 1 Score: 57.0 bits (136), Expect = 8.750e-7
Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFAPGERR 31
            +NLT+R YPH HNMDGFFVAK KKFA GE++
Sbjct:  449 LNLTRRIYPHTHNMDGFFVAKFKKFANGEKK 479          
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Match: A0A7S1YTP1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YTP1_TRICV)

HSP 1 Score: 56.6 bits (135), Expect = 9.560e-7
Identity = 22/33 (66.67%), Postives = 31/33 (93.94%), Query Frame = 0
Query:    1 MNLTQRFYPHVHNMDGFFVAKLKKFAPGERRAT 33
            ++LT+RFYPHVHNMDGFFV+KL+K+A G ++A+
Sbjct:  243 LSLTRRFYPHVHNMDGFFVSKLRKYANGPKKAS 275          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig479.12653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0G3_ECTSI6.320e-4870.92SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=... [more]
A0A6H5JZZ2_9PHAE5.420e-3664.29SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=... [more]
A0A836CI73_9STRA1.570e-881.25Ribosomal RNA methyltransferase nop2like protein p... [more]
A0A7S3IWF1_9SPIT9.480e-872.22Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
A0A078AFW0_STYLE1.370e-778.13Ribosomal rna methyltransferase nop2-like n=1 Tax=... [more]
UPI00044074395.880e-750.79NOL1/NOP2/sun family RNA met n=1 Tax=Fomitiporia m... [more]
T2MG92_HYDVU6.470e-792.31Putative ribosomal RNA methyltransferase NOP2 (Fra... [more]
M4BNJ1_HYAAE8.580e-756.86SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=... [more]
J9IAR9_9SPIT8.750e-774.19Ribosomal RNA methyltransferase nop2-like protein ... [more]
A0A7S1YTP1_TRICV9.560e-766.67Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 74..94
IPR001678SAM-dependent methyltransferase RsmB/NOP2-typePROSITEPS51686SAM_MT_RSMB_NOPcoord: 1..25
score: 10.823

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig479contigL-elsbetiae_contig479:29103..31160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig479.12653.1mRNA_L-elsbetiae_contig479.12653.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig479 28784..31160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig479.12653.1 ID=prot_L-elsbetiae_contig479.12653.1|Name=mRNA_L-elsbetiae_contig479.12653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
MNLTQRFYPHVHNMDGFFVAKLKKFAPGERRATSTSAGVPDTDAPEANEA
GGSADGMDVDNSGSDEDEDSKTKRKRAKKEAKRNANSNKEAQEAVGAEIK
EVNSDEEDGGEESRPAAKKSKPDSAANGHSPAGRGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001678MeTrfase_RsmB/NOP2