prot_L-elsbetiae_contig4780.12635.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4780.12635.1
Unique Nameprot_L-elsbetiae_contig4780.12635.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length630
Homology
BLAST of mRNA_L-elsbetiae_contig4780.12635.1 vs. uniprot
Match: B5LWM1_9PHYC (Putative ubiquitin ligase n=2 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM1_9PHYC)

HSP 1 Score: 367 bits (943), Expect = 5.270e-115
Identity = 231/637 (36.26%), Postives = 352/637 (55.26%), Query Frame = 0
Query:    1 LLGFQRECIEHMVYRPQVVVVNRTVVRTNARGHSTTFGTRH----EARCGRSDIGTTVVNDLMTGSGKTIATMVASIYFAIHRKQEVVDREEILLREQRPTNWSSRVGANDTP-REYSNSVVVMASDKVVAQWEYATSLACTFLGINS-DVHRDPPAESASMSTECVPS--ITIYLFTSVMNLTQFFKRDEGFVACIVVDEFTLKSAHNLVTRNAGEAPLYGRLILVSADAGEASTILLGSRRNSLIRSTVAKSDFDTAGLKTDVNLASTLMACSTLPSASRQAAHDFIFSRLNKVVVEKYNLDFSSPIWGTMDGSLVNDYPKHLEPLGISDLMSVRTVGGLVDKIEILIENYESSSDEKGGCVEEYLPGVPGLKSLRDTCLKFLSSQDDCAVCLEPLKSKNKVCIISPCNHIFCKNCTRSCLEARNTCPFCRVEIDGVFDARPGAMSVGNASVMPADVSGCESFQDFLRACLPNEG----SVLETCCAILEAASFSALKDKSPVKRLVIMGHSKDFARELEKYFRQYQKTKELPATVKVMRFKVGCNKRKRTMLGYEEQLEYFRRDDESDEGVIKVLCTHENTAFTEDVLGLDLHQVDAICHVGRGVTGRTLGRIARLQRVINPSASRIVRLFNLI 625
            LL +Q E I ++V+RP  + + + VVR +  G S T   R     E     SDIG TVVNDL+TGSGKTI T++A++ FA+ R QEV  R ++LLREQR  NWS+R+   D   R+Y N ++VM SD+VV QWE A S AC  L +   ++ R+P     +   +   S  + + LFT+   L ++F  D+GFV C+++DE+  K+ HN VTR   E P+YGRLILVSADA + +  +  SRR+SLIRS V   + +  GLK DV L+ +LMACS L S  R+    +I   LN V +EK+N+   + +WG   G+ +N + ++L  LG++ L ++ T+G    +IE  + +   +      CV  ++    G+++             +C VCL+      +VCI+ PC H+FCK+C+ S L+    CP CR +I G  D  P A     + V    +S   SF+D L   +   G      + +C AI+     S   ++    +++I+    +FA +L  Y            +V+ +       +   +   YE+QLE+FR D+   E V K+LCT+E    T+ ++G+DLH+VDAIC +G  V GR LGR+AR+ +      S+++RLF+LI
Sbjct:   68 LLPYQVEAITNIVFRPSNISLKKQVVRVSREGPSRTRSDRFTYMGEVSFDASDIGVTVVNDLITGSGKTIVTVLAALLFALERGQEVESRLDLLLREQRSNNWSTRLHCEDGGLRQYENKIIVMVSDEVVKQWERAVSQACYMLDLKGVEIRRNPKGFQNAFFPDSPSSTGLEVLLFTTSRALHEYFGGDKGFVPCVIIDEYVAKAPHNTVTRKKKETPIYGRLILVSADAAKTAEAVWNSRRDSLIRSVVLTDEVEKDGLKNDVKLSMSLMACSILSSHERELCFRYIIEGLNTVELEKFNIPLKTSVWGNFTGTKLNSF-ENLRRLGLTQLETILTMGDFRARIED-VGSSSGTISHLSKCVNRFIG--EGMRT-------------ECPVCLQHFAPDKEVCIVGPCWHVFCKDCSTSWLQQGANCPLCRCDITGALDVLPRA---SKSPVQLKPLSQFRSFEDTLSTYMDTIGMFPLDAISSCGAIVG----SLASERGAASKMLIISPMPEFATQLATYLSSLD-----CISVRQLHTDRCVRRPSHSHPSYEQQLEWFRADNHPREKV-KILCTYELIDQTK-LVGIDLHEVDAICSIGSLVDGRRLGRVARIPK-FRGQGSKVLRLFSLI 672          
BLAST of mRNA_L-elsbetiae_contig4780.12635.1 vs. uniprot
Match: Q6XLW4_9PHYC (FirrV-1-D5 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLW4_9PHYC)

HSP 1 Score: 273 bits (698), Expect = 1.630e-78
Identity = 204/677 (30.13%), Postives = 332/677 (49.04%), Query Frame = 0
Query:    1 LLGFQRECIEHMVYRPQVVVVNRTVVRTN----ARGHSTTFGTRHEARCGRSDIGTTVVNDLMTGSGKTIATMVASIYFAIHRKQEVVDREEILLREQRPTNWSSRVG-ANDTPREYSNSVVVMASDKVVAQWEYATSLACTFLGINS-DVHRDP--------PAESASM-STECVPSITIYLFTSVMNLTQFFKRDEGFVACIVVDEFTLKSAHNLVTRNAGEAPLYGRLILVSADAGEASTILLGSRRNSLIRSTVAKSDFDTAG---LKTDVNLASTLMACSTLPSASRQAAHDFIFSRLNKVVVEKYNLDFSSPIWGT-MDGSLVNDYPKHLEPLGISDLMSVRTVGGLVDKIEILIENYESSSDEKGGCVEEYLPGVPGLKSLRDTCLKFLSSQD--DCAVCLEPLKSKNKVCIISPCNHIFCKNCTRSCLEARNTCPFCRVEIDGVFDARPGAMSVGNASVMPADVSGCESFQDFLRACLPN---EGSVLETCCAILEA-ASFSALKDKSPVK-RLVIMGHSKDFARELEKYFRQYQKTKELPATVKVMRFKVGCNKRKRTMLGYEEQLEYFRRDDE----------------------SDEGVIKVLCTHENTAFTED-----VLGLDLHQVDAICHVGRGVTGRTLGRIARLQRVINPSASRIVRLFNL 624
            L  FQ E + + VYRP  ++  + VVRT      R     F    +   G SDIGTTVVND++ GSG+ + TM+A++ FA+ R  +V + + +LLREQR  NW+SRV  A+   ++Y NSVV + S++   QW+ A   AC+ LG+   ++ R+P        P +  S+ S+     + I+ F +   LT+++  D GFV C+VVDEFT ++ HN VTR+  E PLYGRLILVS++A +   ++ GSRR SLIR+              LK+DV ++   M CS +P+ SR+AA  F+   +  + +E++++   S  W T M G   N +   L+ +G+ D MS+ T+G L + +E+      + +D +      +      L  L D   +++S  +  +CA+CL  +    +VC++  C HIFCK C  + L   + CP CR  I G+ D         +  V+P      ESF+   R+   N     +V+  C A++ + ASFS+   +S    R++++    D    L+K  R           V      + C  R      +EE +++   +                          + ++KVL    +     D     + G+D H VDAIC+V   +T   L  I ++   +  +  + +R+F+L
Sbjct:   70 LKDFQIEAVANAVYRPWNIMGKKKVVRTKQQHAVRPREERFTYMADIEMGDSDIGTTVVNDMVCGSGQILTTMLAALVFALRRGDDVRNHKSLLLREQRVMNWASRVSTASLGKKQYHNSVVFLVSERSTRQWQEAAIQACSILGLRGIEIRRNPVISVSPFFPFDEQSVNSSNRRRDLEIHFFNTSTGLTRYYAGDVGFVPCVVVDEFTHRAPHNPVTRSREEIPLYGRLILVSSNAAKIDGLITGSRRESLIRAIAYVPPQQQQAKNLLKSDVKMSMAFMLCSIVPTGSRKAADSFVCDMVGNITLERFDVKLESSAWATYMGGQSFNSFTT-LKRVGLKDTMSMLTIGDLKECVEV------ARTDGRLSLSPHH---AERLNVLHDRLDQYVSEGNGFECAICLRRVPLVEEVCVVGTCWHIFCKKCLGTWLLEHDNCPMCRDMIYGIADLMSSPEPSSDFQVLPRK----ESFESTFRSYFENTHTHANVIRACSAVIASLASFSSSSSRSRTPTRVLVLSAVSDMYASLKKNVRNMNGVNMQELNV------LHCGARV-PRASFEEHVDWLGSNGSVXXXXXXXXXXXXXXXXXXXXXXSDSLVKVLYISVSRNPLSDGASQALAGIDFHDVDAICNVQFRLTSHHLQYITKVPSFLE-TTHKTLRIFDL 724          
BLAST of mRNA_L-elsbetiae_contig4780.12635.1 vs. uniprot
Match: D8LPJ1_ECTSI (EsV-1-172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPJ1_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 8.490e-62
Identity = 209/665 (31.43%), Postives = 326/665 (49.02%), Query Frame = 0
Query:    1 LLGFQRECIEHMVYRPQVVVVNRTVVRTNARGHSTTFGTRHEARCGRS-------DIGTTVVNDLMTGSGKTIATMVASIYFAIHRKQEVVDREEILLREQRPTNWSSRVG---------ANDTPREYSNSVVVMASDKVVAQWEYATSLACTFLGINS-DVHRDPPAESASMSTECVPSITIYLFTSVMNLTQFFKRDEGFVACIVVDEFTLKSAHNLVTRNAGEAPLYGRLILVSADAGEASTILLGSRRNSLIRSTVAKSD---FDTAGLKTDVNLASTLMACSTLPSASRQAAHDFIFSRLNKVVVEKYNL----DFSSPIWGT-MDGSLVNDYPKHLEPLGISDLMSVRTVGGLVDKIEILIENYESSSDEKGGCVEEYLPGVPGLKSLRDTCLKFLSSQDDCAVCLEPLKSKNKVCIISPCNHIFCKNCTRSCLEARN-TCPFCRVEIDG----VFDARPGAMSVGNASVMPADVSGCESFQDFLRACLPNEGSVLETCCAILEAASFSALK------DKSPVKRLVIMGHSKDFARELEKYFRQYQKTKELPATVKVMRFKVGCNKRKR-TMLGYEEQLEYFRRDDESDEGV-IKVLCTHENTAFTEDVLGLDLHQVDAICHVGRGVTGRTLGRIARLQRVINP-SASRIVRLFNLIP 626
            LL FQ + I +M +RP    V +T++RT+  G       R E + G S       DIG   +NDL TGSGKT+ T++ +I FA  R+ E+  R   L+REQ   NWS+RV          + +T   Y+N +VVM +  +++QW+ A + A   LG+    V  +P   S  +S     S+ + L  S  NLT+    D  FV  IVVDEFT+KS  N++T+ A   PL+GR+ILVSADAG    ++ GS R S +R  +   D   F  A +     +   L++ S L +  R A  + + ++L +V  EKY +     F+S I+G+  + S V+      E  GI DL   +T+G ++  +   I+N  ++              +  L  LR+    F+  ++DC +CLE  +  +   +I+PC HI C  C R+ +  ++ TCP CRV+++G    V D +    SV + +  P   +  E+  +   + L N  +VL      LE A    L+         P K ++I+     F +     F    + +   + + ++ FK   NKRK  T     +QL  F     SD G  +K+L T E    T+ + GLD  +VD I  +G G + + LGR+ RL R+++  SAS+ VR   L P
Sbjct:  107 LLPFQIQAILNMAFRPSHTFVAKTILRTSTYGRQEQ--NRTETQVGTSVLKSFDDDIGMMAINDLYTGSGKTLTTVLGAIVFADKRRAEIGARVPFLMREQVHGNWSTRVQCALSKEHQRSPNTFPTYTNVIVVMCAKHLLSQWKSACASALHILGMEEVQVLENPLPGSTELSNA---SLKVLLLHSAANLTRL---DLEFVPVIVVDEFTIKSTSNVLTKPAETMPLHGRMILVSADAGNVRDMIHGSNRRSFLRKMLQWDDISYFPEAHIAMVAGIP--LISASVLQTTDRYAVGELMINKLREVGYEKYTVRYTPSFASRIFGSNFEMSAVSGSRLIRERFGI-DLAGTKTIGQVLRIVSNTIDNLRTTDANSRA--------IAPLTDLRNKISAFVGEKEDCPICLEEYEMDSGASLINPCWHIVCDKCLRAMMAVKHDTCPLCRVKMEGHTTAVIDDQS---SVASGASSPGQNTRIET--NSRLSLLQNMEAVLRPTAG-LEKACIDTLRCIKADVGDQPYKIVMIVPDEHFFTK-----FAIDVREEMTASQIGIIEFKTIGNKRKHVTGKMVCDQLASFA----SDRGPPLKILFTTEGK--TDSLTGLDFPRVDCILSLGDGNSLQRLGRLTRLPRMMDEVSASKTVRYICLEP 735          
BLAST of mRNA_L-elsbetiae_contig4780.12635.1 vs. uniprot
Match: Q8QNB5_ESV1K (EsV-1-172 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB5_ESV1K)

HSP 1 Score: 215 bits (548), Expect = 8.490e-57
Identity = 202/661 (30.56%), Postives = 319/661 (48.26%), Query Frame = 0
Query:    1 LLGFQRECIEHMVYRPQVVVVNRTVVRTNARG-----HSTTFGTRHEARCGRSDIGTTVVNDLMTGSGKTIATMVASIYFAIHRKQEVVDREEILLREQRPTNWSSRVGA----------NDTPREYSNSVVVMASDKVVAQWEYATSLACTFLGINS-DVHRDPPAESASMSTECVPSITIYLFTSVMNLTQFFKRDEGFVACIVVDEFTLKSAHNLVTRNAGEAPLYGRLILVSADAGEASTILLGSRRNSLIRSTVAKSD---FDTAGLKTDVNLASTLMACSTLPSASRQAAHDFIFSRLNKVVVEKYNL----DFSSPIWGT-MDGSLVNDYPKHLEPLGISDLMSVRTVGGLVDKIEILIENYESSSDEKGGCVEEYLPGVPGLKSLRDTCLKFLSSQDDCAVCLEPLKSKNKVCIISPCNHIFCKNCTRSCLEARN-TCPFCRVEIDG----VFDARPGAMSVGNASVMPADV---SGCESFQDFLRACLPNEGSVLETCCAILEAASFSALKDKSPVKRLVIMGHSKDFARELEKYFRQYQKTKELPATVKVMRFKVGCNKRKR-TMLGYEEQLEYFRRDDESDEGV-IKVLCTHENTAFTEDVLGLDLHQVDAICHVGRGVTGRTLGRIARLQRVINP-SASRIVRLFNLIP 626
            LL FQ + + +M +RP+   V +T+ RT   G     H+ T    +  +    DIG   +NDL TGSGKT+ T++ +I FA  R+ E+  R   L+REQ   NWS+RV            N+ P  Y+N +VVM +  + +QW+ A + A   LG+    V  +P   S  +S      + I L  S  NL +    +  FV  IVVDEFT+KSA N++T+ A   PL+GR+ILVSADAG    I+ GS R S +R  +   D   F  A +     +   L++ S L +  R A  + + ++L +V  EKY +     F+S I+G   + S V+      E  GI+ L   +++G ++  +   I+N  ++              +  L  L++    F+  +++C +CLE  +  +   +I+PC HI C  C R+ +  ++ TCP CRV+++G    V D R G  S  ++      V   S     Q+      P  G  LE  C        + + D+ P K ++I+     F +     F    + +   + + ++ FK   NKRK  T     +QL  F     S+ G  +K+L T E    T+ + GLD  +VD I  +G G + + LGR+ RL R+++  SAS+ VR   L P
Sbjct:  179 LLPFQVQAVLNMAFRPRNTFVAKTIFRTRNYGRHEQNHTETQVGTNVLKSFDDDIGMMAINDLYTGSGKTLTTILGAIVFADKRRAEIGARVPFLMREQVHGNWSTRVQCSLSKEHQRPPNNFP-SYTNVIVVMCAKHLFSQWKSACASALHVLGMEGVQVLENPLPGSIQLSDV---GLKIVLLHSATNLARL---ELEFVPVIVVDEFTIKSASNVLTKPAEIMPLHGRMILVSADAGNVKDIIHGSNRRSFLRKMLQWDDISYFPEAHIAMVAGIP--LISASVLQTTDRYAVGELMINKLREVGYEKYTVRYTPSFASRIFGNNFEMSAVSGSRLISERFGIN-LTGTKSIGQVLRIVSNTIDNLRTTDANSRT--------IAPLTDLKNKISAFVGEKENCPICLEEYEMDSGASLINPCWHIVCDKCLRAMMAVKHDTCPLCRVKMEGHTTAVIDDRIGVASDASSRGQNTRVETSSRLSLLQNMDAVLRPTAG--LEKACVDTLRCIKADVGDQ-PYKIVMIVPDEHFFTK-----FANDVREEMTASQIGIIEFKTIGNKRKHVTGKMVSDQLASFA----SNRGPPMKILFTTEGK--TDSLTGLDFPRVDCILSLGDGNSLQRLGRLTRLPRMMDECSASKTVRYVCLEP 807          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4780.12635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
B5LWM1_9PHYC5.270e-11536.26Putative ubiquitin ligase n=2 Tax=Feldmannia speci... [more]
Q6XLW4_9PHYC1.630e-7830.13FirrV-1-D5 n=1 Tax=Feldmannia irregularis virus a ... [more]
D8LPJ1_ECTSI8.490e-6231.43EsV-1-172 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNB5_ESV1K8.490e-5730.56EsV-1-172 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 383..424
e-value: 2.7E-5
score: 33.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 381..425
e-value: 5.7E-9
score: 36.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 383..425
score: 12.784
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 374..435
e-value: 8.6E-13
score: 49.2
NoneNo IPR availablePANTHERPTHR15710:SF61coord: 370..428
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 370..428
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 377..432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4780contigL-elsbetiae_contig4780:7270..9222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4780.12635.1mRNA_L-elsbetiae_contig4780.12635.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4780 7270..9222 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4780.12635.1 ID=prot_L-elsbetiae_contig4780.12635.1|Name=mRNA_L-elsbetiae_contig4780.12635.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=630bp
LLGFQRECIEHMVYRPQVVVVNRTVVRTNARGHSTTFGTRHEARCGRSDI
GTTVVNDLMTGSGKTIATMVASIYFAIHRKQEVVDREEILLREQRPTNWS
SRVGANDTPREYSNSVVVMASDKVVAQWEYATSLACTFLGINSDVHRDPP
AESASMSTECVPSITIYLFTSVMNLTQFFKRDEGFVACIVVDEFTLKSAH
NLVTRNAGEAPLYGRLILVSADAGEASTILLGSRRNSLIRSTVAKSDFDT
AGLKTDVNLASTLMACSTLPSASRQAAHDFIFSRLNKVVVEKYNLDFSSP
IWGTMDGSLVNDYPKHLEPLGISDLMSVRTVGGLVDKIEILIENYESSSD
EKGGCVEEYLPGVPGLKSLRDTCLKFLSSQDDCAVCLEPLKSKNKVCIIS
PCNHIFCKNCTRSCLEARNTCPFCRVEIDGVFDARPGAMSVGNASVMPAD
VSGCESFQDFLRACLPNEGSVLETCCAILEAASFSALKDKSPVKRLVIMG
HSKDFARELEKYFRQYQKTKELPATVKVMRFKVGCNKRKRTMLGYEEQLE
YFRRDDESDEGVIKVLCTHENTAFTEDVLGLDLHQVDAICHVGRGVTGRT
LGRIARLQRVINPSASRIVRLFNLIPFCN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD