prot_L-elsbetiae_contig4778.12624.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4778.12624.1
Unique Nameprot_L-elsbetiae_contig4778.12624.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length272
Homology
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BLAST of mRNA_L-elsbetiae_contig4778.12624.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.480e-5
Identity = 26/39 (66.67%), Postives = 27/39 (69.23%), Query Frame = 0 
Query:    1 MVDVASKACAHPGCTKQPSYGKAGSKP-EYCRGHAKDGM 38
            MVDV SK C HPGCTK+PSYG  GSK  E C  HA  GM
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGM 39
[Close]
BLAST of mRNA_L-elsbetiae_contig4778.12624.1 vs. uniprot
Match: D7FSL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL7_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 5.810e-5
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    1 MVDVASKACAHPGCTKQPSYGKAGSK-PEYCRGHAKDGM 38
            M++V SK C HPGCTK+PS+G  GSK PE+C  HAK  M
Sbjct:    1 MINVYSKRCGHPGCTKRPSFGTTGSKRPEFCSQHAKQDM 39
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4778.12624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI1.480e-566.67EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FSL7_ECTSI5.810e-561.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4778contigL-elsbetiae_contig4778:2155..2970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4778.12624.1mRNA_L-elsbetiae_contig4778.12624.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4778 2100..2970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4778.12624.1 ID=prot_L-elsbetiae_contig4778.12624.1|Name=mRNA_L-elsbetiae_contig4778.12624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=272bp
MVDVASKACAHPGCTKQPSYGKAGSKPEYCRGHAKDGMVNVASKTCTHPG
CTKQPSYGKAGSKPEYCRGHAKDGMVNVASKTCTHPGCTKQPSYGKAGSK
AEHCRDHHAKDRMVNATKKICTHPGCTTRTIYGEGGNLCARHPGEGMSVL
PPSTRRSSRDGCKSDRTESSGLGASGDAGTARGGSSDERRSSQSHSPALV
EIPASTSMEIKKRAAGFGDLRPVRVKRERVGGDRIDEDEPRSCSEPDGVV
KTEDMGVPYKVEPREATGRCV*
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