prot_L-elsbetiae_contig4777.12623.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4777.12623.1
Unique Nameprot_L-elsbetiae_contig4777.12623.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length84
Homology
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BLAST of mRNA_L-elsbetiae_contig4777.12623.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.780e-6
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 0 
Query:    7 NVDSQMPTGAAHLWLAASNGRLYIVRELVPAKTSALATDTS--GGITRVPLDKAAGNNHSKVVRELLHPAG 75
            N D Q+P G+  L +AA  G++ ++REL+    + L   TS  G  T VPLD AA + H+ VVREL+   G
Sbjct:  232 NPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELG 302
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4777.12623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT11_ECTSI1.780e-642.25EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..81
e-value: 5.0E-9
score: 37.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..73
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..71
score: 10.896

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4777contigL-elsbetiae_contig4777:11332..11583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4777.12623.1mRNA_L-elsbetiae_contig4777.12623.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4777 11142..11583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4777.12623.1 ID=prot_L-elsbetiae_contig4777.12623.1|Name=mRNA_L-elsbetiae_contig4777.12623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
MSKAGANVDSQMPTGAAHLWLAASNGRLYIVRELVPAKTSALATDTSGGI
TRVPLDKAAGNNHSKVVRELLHPAGRDRRLRVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom