prot_L-elsbetiae_contig4777.12622.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4777.12622.1
Unique Nameprot_L-elsbetiae_contig4777.12622.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length295
Homology
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BLAST of mRNA_L-elsbetiae_contig4777.12622.1 vs. uniprot
Match: D7G8G2_ECTSI (BHLH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G2_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 7.000e-6
Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 0 
Query:  239 PFSQDHLGSLLRGGXXXXXXXXDALNDNDGYTD-AALNASGLGLWGWCFPSPTPMIGA 295
            PF    LG+L+                N+GY D AAL+A+GLGLWGWCFPSPTP++GA
Sbjct:    2 PFPSHQLGALMAASGGDCGNS----GTNNGYRDVAALDATGLGLWGWCFPSPTPIMGA 55
[Close]
BLAST of mRNA_L-elsbetiae_contig4777.12622.1 vs. uniprot
Match: A0A6H5JG03_9PHAE (BHLH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG03_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.810e-5
Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0 
Query:  239 PFSQDHLGSLLRGGXXXXXXXXDALNDNDGYTD-AALNASGLGLWGWCFPSPTPMIGA 295
            PF    LG+L+                N+GY D AA++A+GLGLWGWCFPSPTP++GA
Sbjct:    2 PFPSHQLGALMAASGGDSGGS----GTNNGYPDVAAMDATGLGLWGWCFPSPTPIMGA 55
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4777.12622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8G2_ECTSI7.000e-650.00BHLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JG03_9PHAE1.810e-548.28BHLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4777contigL-elsbetiae_contig4777:696..3010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4777.12622.1mRNA_L-elsbetiae_contig4777.12622.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4777 647..3010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4777.12622.1 ID=prot_L-elsbetiae_contig4777.12622.1|Name=mRNA_L-elsbetiae_contig4777.12622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=295bp
MSADPLDSVGQGDTWYGYNLSLADEDESQAGKSGGGGGGSGSGSRSPRRT
RGLMADRLFGGLPAHTNPVFSDSSSRKNTQQGSDARKKGGVRVKPEPVLS
AGGRNEMQQQQERQQQQQQPRQQPGRGGGAPPSFASPYGAPSAAVGALGP
SWSLPAASMSNIVYPPPLPPLTTQQQQAWRQQQVLQQQQQRALHHQQQQA
LQQQQQQQAFQQQQQQAFQQQQAFQQHQQHQQQPGGMAPFSQDHLGSLLR
GGGGDGGGGGDALNDNDGYTDAALNASGLGLWGWCFPSPTPMIGA
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