prot_L-elsbetiae_contig4776.12619.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4776.12619.1
Unique Nameprot_L-elsbetiae_contig4776.12619.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length368
Homology
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BLAST of mRNA_L-elsbetiae_contig4776.12619.1 vs. uniprot
Match: A0A6H5L1W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W2_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.010e-16
Identity = 106/278 (38.13%), Postives = 130/278 (46.76%), Query Frame = 0 
Query:    1 MRVEHTRMALAALVAGAATMSLILGVTPVAEGMCVGPQPHGRAALRQSLRPPSSLCSSFSSAFAGRHDDGGRGTPRGDRDGAAGRRKGLSMKASSAKRRVVRSDLYNSIPMVQAQREASRRGQERAALARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTATAAAGTAXXXXXXAQGLPTKRSRGGRSADDGLAAS----AXXXXXXXXXXXXXXXXXXXXXXRRLEPVGRAEAVELLRQAVVKFRGAQVSAAA 274
            MR     + +AA V   AT+ L+LG   VAEGM V P+   RA+ ++S  P SS      SAF+GR    G G       GAA  R+G+ M+A SAKRRV RSD++NSIPMVQAQR  S    +RA LAR  XXXX                                               T TA A ++  XXX    +   + +G   A  GLAA     A                      RRLEP+ RA+AVELLRQAVVK+RGAQVSAA+
Sbjct:    1 MRHFERNIQMAAAVTATATLYLLLGTAAVAEGMRVSPRQ--RASWQRSTSPLSS------SAFSGRRK-AGDGFEASAAGGAAAGRRGMGMRAFSAKRRV-RSDVHNSIPMVQAQRGVS----QRATLARQQXXXXGGAGPLFGVSP------------------------------------TRTAEAASSSGXXXAPSAVAGSQKKG--VAAQGLAAKRKGIAKKTAQAPTTAKTRKRKGRGWRGRRLEPIARADAVELLRQAVVKYRGAQVSAAS 226
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4776.12619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1W2_9PHAE2.010e-1638.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..367
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4776contigL-elsbetiae_contig4776:901..3811 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4776.12619.1mRNA_L-elsbetiae_contig4776.12619.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4776 807..4655 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4776.12619.1 ID=prot_L-elsbetiae_contig4776.12619.1|Name=mRNA_L-elsbetiae_contig4776.12619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=368bp
MRVEHTRMALAALVAGAATMSLILGVTPVAEGMCVGPQPHGRAALRQSLR
PPSSLCSSFSSAFAGRHDDGGRGTPRGDRDGAAGRRKGLSMKASSAKRRV
VRSDLYNSIPMVQAQREASRRGQERAALARKQQQQEEEEKAARLSGAAPT
AATRAGAPPASPAAPAAAGRSEVPKKKSAAAGGTATAAAGTAGTGAAGAQ
GLPTKRSRGGRSADDGLAASAAGDAAPTPPVPERKKKKRRRKQRRLEPVG
RAEAVELLRQAVVKFRGAQVSAAAHPRAPSPPASSSASAAALSPPSSSPS
SSSSPSASASHGTDALGSVGGGGASVDSTGGSGGANTKLYASSSGGVVVS
GTAAAAAAAPAMLVVTA*
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