prot_L-elsbetiae_contig4775.12618.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4775.12618.1
Unique Nameprot_L-elsbetiae_contig4775.12618.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length179
Homology
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: D8LJG4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG4_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 6.370e-59
Identity = 127/180 (70.56%), Postives = 142/180 (78.89%), Query Frame = 0
Query:    1 MLRRIAGRDDDGHDGDRDPQARPGTAGAEESKGGXXXXXXXXXXXX---GAVGSTQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAEAERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECPFCRERWTATAAFRRPGAEDISDDEDED 177
            MLRRIAG D +G              G EE K  XXXXXXXXXXXX   G V S Q+LDAVNDILG+A+LSLS EQGARLKESLRHKDEARVA+ ALAK +AEA+RL R+L ++DKAFVCSICCTNDVD ILA CGHM+CSSC  SI RRECPFCRERWTATA FRRPG +++SDDEDE+
Sbjct: 2255 MLRRIAGEDKEG--------------GVEEGKSXXXXXXXXXXXXXXXXGVVSSAQVLDAVNDILGKAELSLSTEQGARLKESLRHKDEARVARVALAKTSAEADRLKRKLAKVDKAFVCSICCTNDVDVILAPCGHMMCSSCMRSIVRRECPFCRERWTATATFRRPGVDEVSDDEDEE 2420          
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: A0A067CGM9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGM9_SAPPC)

HSP 1 Score: 86.3 bits (212), Expect = 2.450e-16
Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 0
Query:   49 VGSTQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAEAERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECPFCRERWTATAAFRRP 165
            +  TQ+LDAVN++LGR ++SLSA   A ++E+LR K     A+ +   A+   E      K + +A  CS+C  NDV+ +L  CGH+ CS+C G   R +CP CR   +   AF +P
Sbjct: 4323 ISETQVLDAVNELLGRVNMSLSAPYEALVQETLRLKQRLAHAEESYRAASERIEEALVEKKEVLEAMTCSVCFENDVNRVLVPCGHVFCSACVGRFPRNKCPTCRHDISTHCAFHKP 4439          
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: A0A1V9ZU53_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZU53_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.870e-15
Identity = 44/117 (37.61%), Postives = 68/117 (58.12%), Query Frame = 0
Query:   49 VGSTQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAEAERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECPFCRERWTATAAFRRP 165
            V  T +LDAVN++LGR ++SLSA     ++E++R K     A+ +   A+   E   +  K + +A  CS+C  NDV+ +L  CGH+ C +C G + R +CP CR  +T   AF +P
Sbjct: 4330 VAETHVLDAVNELLGRLNMSLSAPYEELMRETVRLKQRLVHAEESFRAASERIEVALQEKKDVLEAMTCSVCLENDVNRVLVPCGHVFCGTCVGRLPRAKCPVCRVDFTTHCAFHKP 4446          
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: A0A6H5K501_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K501_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 1.240e-14
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 0
Query:  135 MLCSSCKGSIARRECPFCRERWTATAAFRRPGAEDISDDEDE 176
            M+CSSC   I RRECPFCRERWTATA FRRPG +D+SDDED+
Sbjct:    1 MMCSSCMRLIVRRECPFCRERWTATATFRRPGVDDVSDDEDD 42          
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: A0A6P4BRP0_ARADU (uncharacterized protein LOC107471784 n=1 Tax=Arachis duranensis TaxID=130453 RepID=A0A6P4BRP0_ARADU)

HSP 1 Score: 72.4 bits (176), Expect = 1.340e-11
Identity = 40/119 (33.61%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   47 GAVGSTQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAEAERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECPFCRERWTATAAFRRP 165
            G V + +L+ AVN+IL  A +S+  E+ A L+ ++  ++  R +QAAL     + E+  +       A+VC +C +N+VD  +  CGH+LC  C  ++++  CPFCR + T      RP
Sbjct:  582 GRVSAGELVQAVNEILSAAGISMDVEKQALLQRTINLQENLRESQAALLLEQEKVEKATKEADTAKAAWVCRVCLSNEVDITIVPCGHVLCRRCSSAVSK--CPFCRLQVTKAIRIFRP 698          
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: UPI000A2B731A (LOW QUALITY PROTEIN: sacsin n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI000A2B731A)

HSP 1 Score: 72.4 bits (176), Expect = 1.560e-11
Identity = 40/119 (33.61%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   47 GAVGSTQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAEAERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECPFCRERWTATAAFRRP 165
            G V + +L+ AVN+IL  A +S+  E+ A L+ ++  ++  R +QAAL     + E+  +       A+VC +C +N+VD  +  CGH+LC  C  ++++  CPFCR + T      RP
Sbjct: 4610 GRVSAGELVQAVNEILSAAGISMDVEKQALLQRTINLQENLRESQAALLLEQEKVEKATKEADTAKAAWVCRVCLSNEVDITIVPCGHVLCRRCSSAVSK--CPFCRLQVTKAIRIFRP 4726          
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: A0A444XAY7_ARAHY (RING-type domain-containing protein n=5 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444XAY7_ARAHY)

HSP 1 Score: 72.4 bits (176), Expect = 1.560e-11
Identity = 40/119 (33.61%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   47 GAVGSTQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAEAERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECPFCRERWTATAAFRRP 165
            G V + +L+ AVN+IL  A +S+  E+ A L+ ++  ++  R +QAAL     + E+  +       A+VC +C +N+VD  +  CGH+LC  C  ++++  CPFCR + T      RP
Sbjct: 4684 GRVSAGELVQAVNEILSAAGISMDVEKQALLQRTINLQENLRESQAALLLEQEKVEKATKEADTAKAAWVCRVCLSNEVDITIVPCGHVLCRRCSSAVSK--CPFCRLQVTKAIRIFRP 4800          
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: A0A2K1K3C6_PHYPA (RING-type domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K3C6_PHYPA)

HSP 1 Score: 71.6 bits (174), Expect = 2.890e-11
Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 0
Query:   47 GAVGSTQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAEAERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECPFCRERWTATAAFRRP 165
            G V + +++ AV D+L  A L + A+Q + L+ SL  +++      AL +    AE   +  +    A+ C +C TN+VDTI+  CGH+LC +C  ++ R  CPFCR   T +    RP
Sbjct: 4661 GNVPAAEVVGAVRDMLAAAGLPMGADQISLLEHSLTLQEQLTAVDTALIEEQRRAETAVKEAEAARAAWTCRVCLTNEVDTIVIPCGHVLCQNCSRAVTR--CPFCRRSVTISQRLYRP 4777          
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: UPI001F5D9130 (sacsin isoform X1 n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D9130)

HSP 1 Score: 70.5 bits (171), Expect = 7.250e-11
Identity = 41/119 (34.45%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   47 GAVGSTQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAEAERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECPFCRERWTATAAFRRP 165
            G V ST+L+ AV+D+L  A + + AE+   L+ +L  +D+ + +Q AL     +AE   +       A+ C +C  ++V+  L  CGH+LC+ C  S++R  CPFCR + + T    RP
Sbjct: 4639 GKVSSTELVQAVHDMLSAAGVRMDAEKETLLQTTLTLQDQLKESQVALLMEQEKAESAVKEADVAKSAWSCRVCLNSEVNMTLIPCGHVLCNRCSSSVSR--CPFCRTQVSRTMKIFRP 4755          
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Match: A0A0A9TQ07_ARUDO (RING-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9TQ07_ARUDO)

HSP 1 Score: 66.2 bits (160), Expect = 7.790e-11
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 0
Query:   47 GAVGSTQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAEAERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECPFCRERWTATAAFRRP 165
            G V ST+L+ AV+D+L  A + + AE+   L+ +L  +D+ + +Q AL     +AE   R       A+ C IC   +V+  +  CGH LC+ C  S++R  CPFCR + +      RP
Sbjct:    8 GKVSSTELVQAVHDMLSAAGVRMDAEKETLLQTTLSLQDQLKESQVALLVEQEKAEAAVREADVAKAAWSCRICLNAEVNMTIIPCGHALCNRCSSSVSR--CPFCRTQVSRMMKIFRP 124          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4775.12618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJG4_ECTSI6.370e-5970.56RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A067CGM9_SAPPC2.450e-1639.32Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZU53_9STRA2.870e-1537.61Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6H5K501_9PHAE1.240e-1476.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P4BRP0_ARADU1.340e-1133.61uncharacterized protein LOC107471784 n=1 Tax=Arach... [more]
UPI000A2B731A1.560e-1133.61LOW QUALITY PROTEIN: sacsin n=1 Tax=Arachis ipaens... [more]
A0A444XAY7_ARAHY1.560e-1133.61RING-type domain-containing protein n=5 Tax=Arachi... [more]
A0A2K1K3C6_PHYPA2.890e-1134.45RING-type domain-containing protein n=3 Tax=Physco... [more]
UPI001F5D91307.250e-1134.45sacsin isoform X1 n=2 Tax=Lolium rigidum TaxID=896... [more]
A0A0A9TQ07_ARUDO7.790e-1134.45RING-type domain-containing protein n=1 Tax=Arundo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..114
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 116..156
e-value: 3.9E-9
score: 36.2
NoneNo IPR availablePANTHERPTHR46919FAMILY NOT NAMEDcoord: 46..162
NoneNo IPR availablePANTHERPTHR46919:SF1ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEINcoord: 46..162
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 111..160
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 117..152
e-value: 5.6E-4
score: 29.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 117..153
score: 11.294
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 97..167
e-value: 1.3E-12
score: 48.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4775contigL-elsbetiae_contig4775:4350..5500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4775.12618.1mRNA_L-elsbetiae_contig4775.12618.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4775 4332..6114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4775.12618.1 ID=prot_L-elsbetiae_contig4775.12618.1|Name=mRNA_L-elsbetiae_contig4775.12618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp
MLRRIAGRDDDGHDGDRDPQARPGTAGAEESKGGEGGGGVGGGGGRGAVG
STQLLDAVNDILGRADLSLSAEQGARLKESLRHKDEARVAQAALAKAAAE
AERLARRLKRIDKAFVCSICCTNDVDTILATCGHMLCSSCKGSIARRECP
FCRERWTATAAFRRPGAEDISDDEDEDR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD