prot_L-elsbetiae_contig4775.12617.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4775.12617.1
Unique Nameprot_L-elsbetiae_contig4775.12617.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length140
Homology
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BLAST of mRNA_L-elsbetiae_contig4775.12617.1 vs. uniprot
Match: D8LJG4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG4_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 8.120e-35
Identity = 75/87 (86.21%), Postives = 78/87 (89.66%), Query Frame = 0 
Query:    1 VALAVAKLVSLPLAAVGPLSVLLATKPDRVESCLRVLQVSSREGAASGEELTRGLPGEPLTKGDMTLLELKPLKAFLPGEVVAWEDK 87
            VALAV KLVSLP AAVGPLSVLLATKPD VESCL VLQV  REGA +G+ELTRGLPGEPLT GD TLLELKPLKAFLPGEV+AWEDK
Sbjct: 2054 VALAVTKLVSLPPAAVGPLSVLLATKPDGVESCLSVLQV--REGATAGDELTRGLPGEPLTPGDKTLLELKPLKAFLPGEVIAWEDK 2138
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BLAST of mRNA_L-elsbetiae_contig4775.12617.1 vs. uniprot
Match: A0A7S2ES17_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ES17_TRICV)

HSP 1 Score: 53.1 bits (126), Expect = 1.750e-5
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0 
Query:   19 LSVLLATKPDRVESCLRVLQVSSREGAASGEELTRGLPGEPLTKGDMTLLELKPLKAFLPGEVVAWEDKDASVLSASSANTVV 101
            L+ +LA+  + + +  + + +S++EG     EL RG PG PL K D  L+ELKPLK F  GEVVA + KD+     S    VV
Sbjct:    3 LAAMLASDQNSISTVKQAMGISAKEGH---NELRRGDPGYPLVKADEVLVELKPLKVFNKGEVVAVK-KDSHAAGRSLVYGVV 81
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BLAST of mRNA_L-elsbetiae_contig4775.12617.1 vs. uniprot
Match: A0A1V9ZU53_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZU53_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.370e-5
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:   44 GAASGEELTRGLPGEPLTKGDMTLLELKPLKAFLPGEVVAWEDKD 88
            GA+ G   +RG PG PL   D+  LELKPL++FLPGE+VA  D +
Sbjct: 4215 GASRGSAPSRGTPGAPLCNEDLAALELKPLRSFLPGEIVAIADAE 4259
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4775.12617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJG4_ECTSI8.120e-3586.21RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2ES17_TRICV1.750e-540.96Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1V9ZU53_9STRA2.370e-553.33Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..140
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.494

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4775contigL-elsbetiae_contig4775:1671..3119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4775.12617.1mRNA_L-elsbetiae_contig4775.12617.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4775 1671..3121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4775.12617.1 ID=prot_L-elsbetiae_contig4775.12617.1|Name=mRNA_L-elsbetiae_contig4775.12617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
VALAVAKLVSLPLAAVGPLSVLLATKPDRVESCLRVLQVSSREGAASGEE
LTRGLPGEPLTKGDMTLLELKPLKAFLPGEVVAWEDKDASVLSASSANTV
VDTTAPSGSSSSSSSSSSSSILRYGVVVIAGGGAAEAFDG
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