prot_L-elsbetiae_contig477.12609.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig477.12609.1
Unique Nameprot_L-elsbetiae_contig477.12609.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length268
Homology
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BLAST of mRNA_L-elsbetiae_contig477.12609.1 vs. uniprot
Match: D8LEC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC3_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 3.190e-142
Identity = 208/265 (78.49%), Postives = 225/265 (84.91%), Query Frame = 0 
Query:    2 LWRWRIAVLLALVSADLVGA-RKTGGSXXXXXGEFLSGVSGTYTHFHDDDLSFTVAYDLQDDSSVPFSYVTGVSVTRAQDLYRKMDPTEPLARLTLTGSAHIKQRSPSGGATIDTRNRTAGVNINHAMRRAQFRFARTFMDGRFKVGLNPVVTYGPLRKRRINFSTLVPPYRPLLSESGIPSMSLQQRNIVWDWAQGAPPRSPLHGLGVSLRLHTGRTGGLLSATLFDGTDRSRLWSMRAEVPLTKPSNACFTVERAWQVPTTVT 265
            LWRW +AVLLAL+S     A R TGGS      + LS VSGTYTHF DDDLS TV+YDLQDDSS+PFSY+TGVSVT+AQDLYRK  PTEPLARLTLTGSA IKQR PSGGA IDT N+T G+NINHA RRAQFRF R FMDGRFKVGLNPVVTYG LR+RR+NFSTLVPPYRP LSESG+PSMSLQQR++VWDWAQG P  SPLHGLGV+LRLHTGR   LLSATLFDGTDRSRLWS+RA+VPL KPSN CFT ERAWQVPTT T
Sbjct:    3 LWRWGVAVLLALLSCSTTNAGRSTGGSGDPM--DLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTGVSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHAARRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPLHGLGVALRLHTGRRA-LLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTNT 264
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BLAST of mRNA_L-elsbetiae_contig477.12609.1 vs. uniprot
Match: A0A6H5J9R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9R3_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 4.920e-108
Identity = 166/229 (72.49%), Postives = 185/229 (80.79%), Query Frame = 0 
Query:   37 SGVSGTYTHFHDDDLSFTVAYDLQDDSSVPFSYVTGVSVTRAQDLYRKMDPTEPLARLTLTGSAHIKQRSPSGGATIDTRNRTAGVNINHAMRRAQFRFARTFMDGRFKVGLNPVVTYGPLRKRRINFSTLVPPYRPLLSESGIPSMSLQQRNIVWDWAQGAPPRSPLHGLGVSLRLHTGRTGGLLSATLFDGTDRSRLWSMRAEVPLTKPSNACFTVERAWQVPTTVT 265
            +G+   + H    D SF + +     S   F+  + VSVT+AQDLYRK  PTEPLARLTLTGSA IKQR PSGGA IDT N+T G+NINHA RRAQFRF R FMDGRFKVGLNPVVTYG LR+RR+NFSTLVPPYRP LSESG+PSMSLQQR++VWDWAQG P  SPL+GLGV+LRLHTGR   LLSATLFDGTDRSRLWS+RA+VPL KPSN CFT ERAWQVPTT T
Sbjct:    7 AGIHRPHGHVWIPDTSFVIVHV---GSPHRFNPDSRVSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHASRRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPLNGLGVALRLHTGRRA-LLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTNT 231
[Close]
BLAST of mRNA_L-elsbetiae_contig477.12609.1 vs. uniprot
Match: A0A6H5JDN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN2_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 8.370e-18
Identity = 46/72 (63.89%), Postives = 52/72 (72.22%), Query Frame = 0 
Query:    2 LWRWRIAVLLALVSADLVGA-RKTGGSXXXXXGEFLSGVSGTYTHFHDDDLSFTVAYDLQDDSSVPFSYVTG 72
            LWRW +A LLAL+S     A R T GS      + LS VSGTYTHF DDDLS TV+YDLQDDSS+PFSY+TG
Sbjct:    3 LWRWGVAGLLALLSCSTTNAGRSTAGSNDPM--DLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTG 72
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig477.12609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEC3_ECTSI3.190e-14278.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9R3_9PHAE4.920e-10872.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDN2_9PHAE8.370e-1863.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..267
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.888

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig477contigL-elsbetiae_contig477:5679..10301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig477.12609.1mRNA_L-elsbetiae_contig477.12609.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig477 4633..10337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig477.12609.1 ID=prot_L-elsbetiae_contig477.12609.1|Name=mRNA_L-elsbetiae_contig477.12609.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=268bp
MLWRWRIAVLLALVSADLVGARKTGGSGGGGGGEFLSGVSGTYTHFHDDD
LSFTVAYDLQDDSSVPFSYVTGVSVTRAQDLYRKMDPTEPLARLTLTGSA
HIKQRSPSGGATIDTRNRTAGVNINHAMRRAQFRFARTFMDGRFKVGLNP
VVTYGPLRKRRINFSTLVPPYRPLLSESGIPSMSLQQRNIVWDWAQGAPP
RSPLHGLGVSLRLHTGRTGGLLSATLFDGTDRSRLWSMRAEVPLTKPSNA
CFTVERAWQVPTTVTRC*
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