prot_L-elsbetiae_contig4765.12602.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4765.12602.1
Unique Nameprot_L-elsbetiae_contig4765.12602.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length598
Homology
BLAST of mRNA_L-elsbetiae_contig4765.12602.1 vs. uniprot
Match: A0A6H5KHJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ1_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.870e-127
Identity = 301/616 (48.86%), Postives = 362/616 (58.77%), Query Frame = 0
Query:    5 TGDEEAAEALRRQVFSNEKGFLESSAFNPARARAEREEEEARTLAAQWGSTPERAKEVIKRTKDDKELSFQELEGIAKELNMSDGQQRAFMLQASMKKLSASTRIPRRTPPSRVKKAVNDRVFASEKGFLKNSAAFKSRLQVGSGVAFDAQGFPVVGDDDPVVQAAKKTAKA-RRSAEVSGVEGVTFPSLXXXXGCSSPTMEDELSQFGMCSQCKALEISSKAYSGPQVASKYTYDNGDAPFSNSWTAP----LNAKAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRSETLSPPAPIPRAETAMPVKGGKSGXXXXXXXXXXXXXXXXXXXXXXXPTATAT-ETVA----RVXXXXXXXXARRVASASGIEDRVRFSGSAANPSTGNAARLKGGAAPAVSQSAAAVTAAGARRDQAPRRGG-DGE----------SGDAAVRKLALEVAELRTLLEINRTALARVEATGRR-TAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDALRKLNRQVAELRKELSAVGDKVS-GXXXXXXXXXEETEAAQKMKREVAELRSQLESARKETALTRSALRRLQGDVDDLRKAVASR 597
            T D EAAEALRRQVF+NEKGF  SS FNP RAR EREEEEAR LAAQWGSTPERAKE++ +T DDK+LSFQEL+ I +ELNMSD QQRAFMLQASMKKLSA++R+P+R PP RVK+ +N+RVFASEKGFL+NSA FK++++VGS V FD+ G PV  + DPV+QAA++T KA +R+AE SGVEG+TFPSL     CS PT EDELS+F MCSQCKA +ISSKAY+GPQ+ASKYTYDNGDAPFS+SWT+P     N  A                  XXXXXXXXXXXXXXXXXX                  +  +     P    A P++ G                          P+ATAT  TVA    R             A+A+  E+    S  ++N   G  + +    +PA    AA  +  GA     PR GG DG+            + AVRKL+LEVAELRTLL INR+ LARVE   +  TAP                             D A++KL R VAELR +LS V DKVS            ++E  Q M          L++ARKETALTRSALRRLQG+VD L+K  A R
Sbjct:   99 TADAEAAEALRRQVFANEKGFEASSVFNPTRAREEREEEEARALAAQWGSTPERAKEIVSKTIDDKDLSFQELQRITEELNMSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDSYGLPVADERDPVIQAARETTKANQRAAEKSGVEGITFPSLPDCPRCSMPTTEDELSRFDMCSQCKAQDISSKAYAGPQMASKYTYDNGDAPFSSSWTSPGPPSTNGGASTESGKTAEVLPQKLSEEXXXXXXXXXXXXXXXXXXSAPIDPRRADPPPSWPSGDNDNDRGEAPTG-AAGPLRKGNGNLRSTTGSRSHRNLGNSAPDAITPPSATATGSTVAAASVRRHGTPGALPRPTAAAAAPAENTAVDSKRSSNTKVGGGSDI---ISPAPGPFAARASKGGAVSRDRPRGGGSDGDVSLGDTKGNGRAEVAVRKLSLEVAELRTLLGINRSTLARVETMSKSATAPQTTTEGRGTASNNEVQRR-----------DTAVQKLARDVAELRAQLSTVVDKVSDSSVTPPRGRGGDSEVVQTMXXXXXXXXXXLDNARKETALTRSALRRLQGEVDVLQKKSAGR 699          
BLAST of mRNA_L-elsbetiae_contig4765.12602.1 vs. uniprot
Match: D7FVK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK9_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 1.670e-93
Identity = 268/544 (49.26%), Postives = 323/544 (59.38%), Query Frame = 0
Query:   86 MSDGQQRAFMLQASMKKLSASTRIPRRTPPSRVKKAVNDRVFASEKGFLKNSAAFKSRLQVGSGVAFDAQGFPVVGDDDPVVQAAKKTAKA-RRSAEVSGVEGVTFPSLXXXXGCSSPTMEDELSQFGMCSQCKALEISSKAYSGPQVASKYTYDNGDAPFSNSWTAPLNAKAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------DRSETLSPPAPIPRAETAMPVKGGKSGXXXXXXXXXXXXXXXXXXXXXXXPTATAT-ETVARVXXXXXXXXA---RRVASASG-----IEDRVRFSGSAANPSTGNAARLKGGAAPAVSQSAAAVTAAGARRDQAPRRGG-DG----------ESGDAAVRKLALEVAELRTLLEINRTALARVEATGRRTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDALRKLNRQVAELRKELSAVGDKVS-GXXXXXXXXXEETEAAQKMKREVAELRSQLESARKETALTRSALRRLQGDVDDLRKAVASR 597
            MSD QQRAFMLQASMKKLSA++R+P+R PP RVK+ +N+RVFASEKGFL+NSA FK++++VGS V FD+ G PV  + DP++QAA++T KA +R+AE SGVE +TFPSL     CS PT EDELS+F MCSQCKA EI+SKAY+GPQ+ASKYTYDNGDAPFS+SWT+P+  K   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      DR E+       P   +A P++ G                          P+ATAT  TVA              R  A+A+      + D  R S +     + N +R  G         AA  +  GA     PR GG DG          +  + AVRKL+LEVAELRTLL INR+ALARVE T  ++A A                            D A+RKL R VAELR +LS V DKVS            ++E  Q MKRE+AELRSQL++ARKET LTRSALRRLQG+VD L+K  A R
Sbjct:    1 MSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDSHGLPVADERDPIIQAARETTKANQRAAEKSGVEAITFPSLPDCPRCSMPTTEDELSRFEMCSQCKAQEITSKAYAGPQMASKYTYDNGDAPFSSSWTSPVPPKTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPIDTRRAGAPSTWSYGDNDNDRGES-------PTGASAGPLRKGNGNLRSTTGSGSHRNLGNSAPDTVSPPSATATGSTVAAASFRGDGVPGAFPRAAATAAAPADNTVVDTKRSSNAKVGGGSDNFSRAPG-------PFAARASKGGAVSRDRPRGGGSDGGVSSGETKGNDRAEVAVRKLSLEVAELRTLLGINRSALARVE-TMSKSAKAPQPTTEGRGAASNNEDQRR---------DTAVRKLARDVAELRAQLSTVVDKVSDSAVTPPSGRGGDSEVVQTMKREMAELRSQLDNARKETTLTRSALRRLQGEVDVLQKKFAGR 520          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4765.12602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHJ1_9PHAE1.870e-12748.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK9_ECTSI1.670e-9349.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 552..572
NoneNo IPR availableCOILSCoilCoilcoord: 514..534
NoneNo IPR availableGENE3D1.10.8.1170coord: 487..576
e-value: 5.1E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4765contigL-elsbetiae_contig4765:2363..13465 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4765.12602.1mRNA_L-elsbetiae_contig4765.12602.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4765 2363..13465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4765.12602.1 ID=prot_L-elsbetiae_contig4765.12602.1|Name=mRNA_L-elsbetiae_contig4765.12602.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=598bp
MKKGTGDEEAAEALRRQVFSNEKGFLESSAFNPARARAEREEEEARTLAA
QWGSTPERAKEVIKRTKDDKELSFQELEGIAKELNMSDGQQRAFMLQASM
KKLSASTRIPRRTPPSRVKKAVNDRVFASEKGFLKNSAAFKSRLQVGSGV
AFDAQGFPVVGDDDPVVQAAKKTAKARRSAEVSGVEGVTFPSLPDCPGCS
SPTMEDELSQFGMCSQCKALEISSKAYSGPQVASKYTYDNGDAPFSNSWT
APLNAKAQAAAAAATPAAKNDRPERGRGRGRGPAASPVYSPAPPPPPSPP
PPVAAASSDRSETLSPPAPIPRAETAMPVKGGKSGGGGGGGGGPTAAAAA
AAAAAATAPTATATETVARVAAAGAAADARRVASASGIEDRVRFSGSAAN
PSTGNAARLKGGAAPAVSQSAAAVTAAGARRDQAPRRGGDGESGDAAVRK
LALEVAELRTLLEINRTALARVEATGRRTAPAAAAPAAEAAGARNSSSSS
SSSGDDGRRRDDALRKLNRQVAELRKELSAVGDKVSGGGGGGGGGGEETE
AAQKMKREVAELRSQLESARKETALTRSALRRLQGDVDDLRKAVASR*
back to top