prot_L-elsbetiae_contig476.12596.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig476.12596.1
Unique Nameprot_L-elsbetiae_contig476.12596.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length228
Homology
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: A0A6H5JRL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL5_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 4.580e-65
Identity = 189/241 (78.42%), Postives = 191/241 (79.25%), Query Frame = 0
Query:    1 MSYYNDGGGQGGAXXXXXXXXXXXXXXXXXXXXX--------------YNRRPGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NRRPGDWDCPSCSNHCFASRVECNRCQTPKPEGAGGGGGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGYNKRPGDWDCPGCGYNCFASRMECNRCHTPKPVGGPVAPGG 226
            MSYYNDGGG G  XXXXXXXXXXXXXXXXXXXXX              YNRRPGDWECPSCGNNCFASRVECNRCQTPKP GA         XXXX   XXXXXXXXXXXX   XXXXXXXXXXXXX NRRPGDWDCPSC NHCFASRV CNRC TP+PEGAGGG         XXXXXXXXXXXXXXXXXXXXXXXX  Y+KRPGDWDCP CGYNCFASRMECNRCHTPKPVGG VAPGG
Sbjct:    1 MSYYNDGGGHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGYNRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYGERGXXXXXXXXXXXXXXXXXXXGYSXXXXXXXXXXXXXYNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGG-----FERGXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPSCGYNCFASRMECNRCHTPKPVGG-VAPGG 235          
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: D8LIQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ0_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 3.450e-41
Identity = 165/230 (71.74%), Postives = 168/230 (73.04%), Query Frame = 0
Query:    1 MSYYNDGGGQGG-----------AXXXXXXXXXXXXXXXXXXXXXYNRRPGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRPGDWDCPSCSNHCFASRVECNRCQTPKPEGAGGGGGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGYNKRPGDWDCPGCGYNCFASRMECNRCHTPKPVG 219
            MSYYN+ GG GG             XXXXXXXXXXXXXXXXXXXX N+RPGDWECPSCGNNCFASR ECNRCQTPKP GA  XXXX XXXXXXY          XXXXXX XXXXXXXXXXXXX  R GDW CPSC N+CFA R ECNRCQTPKP G GG      XXXXXXX XXXXXXXXXXXXXXXXXXXX     R GDW CP CG  CFA R ECNRC TPKP G
Sbjct:    1 MSYYNNDGGGGGYGXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXNKRPGDWECPSCGNNCFASRSECNRCQTPKPAGAGGXXXXYXXXXXXYX---------XXXXXXYXXXXXXXXXXXXXXXREGDWTCPSCGNNCFAFRQECNRCQTPKPGGEGG-----XXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXREGDWTCPSCGNICFAFRNECNRCQTPKPNG 216          
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: A0A6H5L8L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8L8_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 1.200e-35
Identity = 137/181 (75.69%), Postives = 138/181 (76.24%), Query Frame = 0
Query:   39 PGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRPGDWDCPSCSNHCFASRVECNRCQTPKPEGAGGGGGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGYNKRPGDWDCPGCGYNCFASRMECNRCHTPKPVG 219
            P  WECPSCGNNCFASR ECNRCQTPKP G XXXXX        Y  XXXXXXXXXXXXXXXXXXXXXXXXXXXX  R GDW CPSC N+CFA R ECNRCQTPKP    GG G   XXXXXXXXXXXXXXXXXXXXXXXXXXXX     R GDW CP CG NCFA R ECNRC TPKP G
Sbjct:    5 PPGWECPSCGNNCFASRSECNRCQTPKPAGXXXXXXG-------YGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREGDWACPSCGNNCFAFRQECNRCQTPKP----GGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGDWACPSCGNNCFAFRNECNRCQTPKPSG 174          
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: A0A8J6C3G0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C3G0_DIALT)

HSP 1 Score: 120 bits (300), Expect = 1.590e-29
Identity = 124/200 (62.00%), Postives = 132/200 (66.00%), Query Frame = 0
Query:   38 RPGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRPGDWDCPSCSNHCFASRVECNRCQTPKPEGAGGGGGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGYNKRPGDWDCPGCGYNCFASRMECNRCHTPKP----------VGGPVAPGGY 227
            RPGDW CP CG N FAS+  C RCQ PKP G              Y  XXXXXXXXXXXXXXXXXXXXXXXXXXX + RPGDW CP C  + F+S+  C RCQTPKP G GGGG Y  XXXXXXXXXX   XXXXXXXXXXXXX     + RPGDW CPGCG N FAS+  C RC +PKP           GGP APGGY
Sbjct:   81 RPGDWNCPGCGANVFASKNSCFRCQAPKPGGGG------------YGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVRPGDWVCPGCQANVFSSKNSCFRCQTPKPAG-GGGGXYXXXXXXXXXXXXPPPXXXXXXXXXXXXX-----DVRPGDWTCPGCGANVFASKNSCFRCQSPKPDDGGYKKDDGYGGP-APGGY 261          
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: A0A2V0NK80_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NK80_9CHLO)

HSP 1 Score: 121 bits (304), Expect = 4.060e-28
Identity = 114/180 (63.33%), Postives = 117/180 (65.00%), Query Frame = 0
Query:   38 RPGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRPGDWDCPSCSNHCFASRVECNRCQTPKPEGAGGGGGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGYNKRPGDWDCPGCGYNCFASRMECNRCHTPKP 217
            RPGDW CPSCGNNC+A R  CNRC TPKP G      XXXXX             XXXXXXXXXXXXXXXXXXXXX  RPGDW CP C N+CF  R  CNRC  PKP GAG         XXXXXXXXXX  XXX  XXXXXXXXX     RPGDW C GCG NCFA R  CNRC  P+P
Sbjct:  147 RPGDWPCPSCGNNCYAFRNACNRCGTPKPDGGGGAAGXXXXXGYGXX--------XXXXXXXXXXXXXXXXXXXXXXXRPGDWPCPGCGNNCFGWREACNRCGAPKPPGAG---------XXXXXXXXXXPGXXXARXXXXXXXXXXXXXARPGDWPCSGCGQNCFAWREACNRCGAPRP 309          
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: A0A5J4XE95_9CHLO (RNA-binding cabeza n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XE95_9CHLO)

HSP 1 Score: 110 bits (274), Expect = 1.500e-24
Identity = 90/180 (50.00%), Postives = 99/180 (55.00%), Query Frame = 0
Query:   38 RPGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRPGDWDCPSCSNHCFASRVECNRCQTPKPEGAGGGGGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGYNKRPGDWDCPGCGYNCFASRMECNRCHTPKP 217
            RPGDW CP C NNCFAS+  C +C  PKP  A XXXXXXXXXXXX               XXXXXXXXXXXX      RPGDW CP+C+N CFAS+ +CNRC TPKP GAG       XXXXX                             P DW CPGCG   +A R  CN+C+TPKP
Sbjct:  180 RPGDWPCPGCNNNCFASKSACPKCGAPKPADAGXXXXXXXXXXXXXX-------------XXXXXXXXXXXXPRPKEARPGDWPCPNCNNICFASKDKCNRCDTPKPPGAGXXXXXXXXXXXXGRVQAAPQGPAGLFA--------------PEDWTCPGCGNRNWARRNSCNQCNTPKP 332          
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: A0A7S2SNJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SNJ9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.290e-22
Identity = 68/185 (36.76%), Postives = 75/185 (40.54%), Query Frame = 0
Query:   36 NRRPGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRPGDWDCPS--CSNHCFASRVECNRCQTPK-PEGAGGGGGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGYNKRPGDWDCPGCGYNCFASRMECNRCHTPKP 217
            N RPGDW CP C  N FASR EC +C+TPKP GA             Y G                              R GDW CPS  CS H +ASR  C RC  P+ P    GGGGYP                                 +RPGDW C  CG NCFASR  C +C+ PKP
Sbjct:  227 NTRPGDWTCPECRANVFASRNECYKCRTPKPPGAGESQPP-------YSGHTPYNGGYHVPPMGQGPPNGF---------RAGDWLCPSPQCSAHNYASRTTCFRCNGPRGPPAPMGGGGYPPQQFAPYGGNQYQRRPPA---------------ERPGDWKCS-CGANCFASRDRCFKCNAPKP 379          
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: D7FHH5_ECTSI (Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH5_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 9.520e-19
Identity = 103/135 (76.30%), Postives = 104/135 (77.04%), Query Frame = 0
Query:    1 MSYYNDGGGQGGAXXXXXXXXXXXXXXXXXXXXX--------------YNRRPGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NRRPGDW 120
            MSYYNDGGG GGA     XXXXXXXXXXXXXXXX              YNRRPGDWECP+CGNNCFASRVECNRCQTPKP GA  XX   XXXXXX QG  XXXXXXXXXXXXXXXXXXXXXXXXX  NRRPGDW
Sbjct:    1 MSYYNDGGGHGGAGEGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNRRPGDWECPNCGNNCFASRVECNRCQTPKPVGAGGXXYGEXXXXXXXQGGGXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDW 135          
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: A0A7S2STL9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STL9_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.140e-18
Identity = 72/120 (60.00%), Postives = 79/120 (65.83%), Query Frame = 0
Query:   36 NRRPGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRPGDWDCPSCSNHCFASRVECNRCQTPKPEGAGGGGGYPA 155
            +RR GDW+CPSCG   FAS+  C +CQTP+P G                G   XXXXXXXXXXXXXXXXXXXXXXXXX+RR GDWDCPSC  HCFASR  C +C TP P   G  GGY A
Sbjct:   37 DRRAGDWDCPSCGALVFASKSNCYKCQTPRPDGG---------------GGYGXXXXXXXXXXXXXXXXXXXXXXXXXDRRAGDWDCPSCGAHCFASRSTCFKCGTPNPGPGGPDGGYGA 141          
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Match: A0A8H7S5E3_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S5E3_9FUNG)

HSP 1 Score: 88.6 bits (218), Expect = 1.320e-16
Identity = 80/189 (42.33%), Postives = 93/189 (49.21%), Query Frame = 0
Query:   38 RPGDWECPSCGNNCFASRVECNRCQTPKPQGAXXXXXXXXXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRPGDWDCPS--CSNHCFASRVECNRCQTPKPEGAGGGGGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGYNK-----RPGDWDCPG--CGYNCFASRMECNRCHTPKP 217
            RPGDW CP+C  + FASR  C +C T  PQ              X                 XXXXXXXXXXX   N  PGDW CP+  C+ H +ASRV+C +C T +P+G  G G    XXXXXXXXX                    GY++     RPGDW CP   CG+  FASR  C RCHTP P
Sbjct:  471 RPGDWNCPNCAFHNFASRRHCFKCNTENPQAPPGPPGMPPQQHGXXX---------------XXXXXXXXXXXTPPNFTPGDWMCPNYQCNFHNYASRVQCLKCGTYRPQGGAGSGXXXXXXXXXXXXX--------------------GYHRPPITFRPGDWYCPNPACGFQNFASRTACFRCHTPNP 624          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig476.12596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRL5_9PHAE4.580e-6578.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ0_ECTSI3.450e-4171.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8L8_9PHAE1.200e-3575.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J6C3G0_DIALT1.590e-2962.00Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A2V0NK80_9CHLO4.060e-2863.33Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A5J4XE95_9CHLO1.500e-2450.00RNA-binding cabeza n=1 Tax=Trebouxia sp. A1-2 TaxI... [more]
A0A7S2SNJ9_9STRA2.290e-2236.76Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
D7FHH5_ECTSI9.520e-1976.30Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocar... [more]
A0A7S2STL9_9STRA1.140e-1860.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8H7S5E3_9FUNG1.320e-1642.33Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 78..93
score: 55.47
coord: 155..173
score: 40.13
coord: 104..114
score: 35.23
coord: 7..18
score: 54.17
NoneNo IPR availableGENE3D4.10.1060.10coord: 31..77
e-value: 3.2E-12
score: 47.4
coord: 182..221
e-value: 2.7E-11
score: 44.4
NoneNo IPR availableGENE3D4.10.1060.10coord: 110..147
e-value: 1.8E-12
score: 48.2
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 38..146
coord: 116..218
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 191..215
e-value: 8.4E-7
score: 38.6
coord: 118..142
e-value: 1.8E-6
score: 37.5
coord: 40..64
e-value: 1.1E-6
score: 38.2
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 116..144
e-value: 2.1E-9
score: 36.5
coord: 38..67
e-value: 6.7E-9
score: 34.9
coord: 189..217
e-value: 5.3E-9
score: 35.2
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 116..145
score: 10.828
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 38..67
score: 10.76
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 189..218
score: 10.297
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 31..68
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 181..218
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 108..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig476contigL-elsbetiae_contig476:25347..29096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig476.12596.1mRNA_L-elsbetiae_contig476.12596.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig476 23937..29251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig476.12596.1 ID=prot_L-elsbetiae_contig476.12596.1|Name=mRNA_L-elsbetiae_contig476.12596.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp
MSYYNDGGGQGGADGGGGGGWGGGGGGGRGGGGGYNRRPGDWECPSCGNN
CFASRVECNRCQTPKPQGAGGGGGYDRGGGGGYQGGGGGYGGGGGGGYQG
GGGYQGGGGGGGYNRRPGDWDCPSCSNHCFASRVECNRCQTPKPEGAGGG
GGYPAGGGGGYQGGGGGYQGGGGGGYQGGGGGGGGYNKRPGDWDCPGCGY
NCFASRMECNRCHTPKPVGGPVAPGGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf