prot_L-elsbetiae_contig2143.6550.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2143.6550.1
Unique Nameprot_L-elsbetiae_contig2143.6550.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length227
Homology
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BLAST of mRNA_L-elsbetiae_contig2143.6550.1 vs. uniprot
Match: A0A6H5KW75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW75_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 6.580e-8
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:  188 STPKKSKSPRHRPRSPRPVSKEYDLWTDNTL-DSSDFSFF 226
            S+  +SKSPRHRPRSPRP +KEYDLWTDNTL   SDFSFF
Sbjct:  959 SSKSRSKSPRHRPRSPRPSNKEYDLWTDNTLVGDSDFSFF 998
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2143.6550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KW75_9PHAE6.580e-877.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2143contigL-elsbetiae_contig2143:16490..19158 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2143.6550.1mRNA_L-elsbetiae_contig2143.6550.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2143 16490..19290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2143.6550.1 ID=prot_L-elsbetiae_contig2143.6550.1|Name=mRNA_L-elsbetiae_contig2143.6550.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp
GSFVTPEVRPASRSSAPVARTGGGRSRQHREPDSREVNIGVEPATYRSRS
DRQPSGPARRSKKPSRSLSQDPPARSQQASESTAEAAGSRKKSASSGRKS
GGGGSGGDSGRPKKKDKSSSSSSGSGYSSSSGRDRDRGRRDGGGGDGDDR
RQQRHRSFDGGGRGGGGGGGRGGGGGGGAPSGGRKGGSTPKKSKSPRHRP
RSPRPVSKEYDLWTDNTLDSSDFSFF*
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