prot_L-elsbetiae_contig21388.6537.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig21388.6537.1
Unique Nameprot_L-elsbetiae_contig21388.6537.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length185
Homology
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 1.700e-98
Identity = 161/185 (87.03%), Postives = 172/185 (92.97%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVRQWKPKLE +FREANQFGVAVAGGVERVAMEAQ VH TGNW+ QTDCSNAFNTGKRTAIMAQAAKSLP+LV YIARCYD +PATAVYEMDSGERR L+CTSGVQQGDG+GPPLFSLILIPIILKLQ KYKPL VA KAY+DDITLHL+DLTEE++QAM DLV+ELA VGIVVNR K
Sbjct:  627 RRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAK 811          
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 1.670e-89
Identity = 136/185 (73.51%), Postives = 158/185 (85.41%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVR+WKPKLE IFREA+QFGVAVAGGVE+VAM+AQ VH TG+WV QTDCSNAFNTGKRTAIMAQAAKS+P+LV YIARCYD +PA A+Y MDSG RR ++C  GVQQGDG+GPPLF  IL+PIILKL+ KY  L V  KAY+DDI+LH +++T E IQ + DLV+EL AVGI+VNR K
Sbjct:  179 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGK 363          
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 1.490e-88
Identity = 135/185 (72.97%), Postives = 159/185 (85.95%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVR+WKPKLE IFREA+QFGVAVAGGVE+VAM+AQ VH TG+WV QTDCSNAFNTGKRTAIMA+AAKS+PNLV YIARCYD + A ++Y MDSGERR ++C SGVQQGDG+GPPLF  IL PI+LKL+ KY  L V+ KAY+DDI+LH +++T E IQ + DLV+EL AVGI+VNR K
Sbjct:   45 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGK 229          
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 1.190e-86
Identity = 136/185 (73.51%), Postives = 159/185 (85.95%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVR+WKPKLE IFREA+QFGVAVAGGVE+VA++AQ VH TG+WV QTDCSNAFNTGKRTAIMAQA+KS+P+LV YIARCYD +PA A+Y MDSGERR ++C SGVQQGDG+GPPLF  IL+PI+LKL+ KY  L V  KAY+DDI+LH +D+T E IQ   DLV+EL AVGI+VNR K
Sbjct:  456 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGK 640          
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 1.320e-86
Identity = 132/185 (71.35%), Postives = 157/185 (84.86%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVR+WKPKLE IFREA+QFGVAVAGGVE+VAM+AQ VH TG+WV QTDCS+AFNTGKRT IMAQAAKS+P+++ YIARCYD +PA A+Y MDSGERR ++C SGVQQGDG+GPPLF  IL+PI+LKL+  Y  L V  KAY+DDI+LH  ++T E IQ + DLV+EL AVGI+VNR K
Sbjct:   81 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGIIVNRGK 265          
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 1.980e-86
Identity = 137/185 (74.05%), Postives = 160/185 (86.49%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVR+WKPKLE IFREA+QFGVAVAGGVE+VAM+AQ VH TG+WV QTDCSNAFNTGKRTAIMAQAAKS+P+LV YIARCYD +PA A+Y MDSGERR ++C SGVQQGDG+GPPLF  IL+PI+LKL+ KY  L V  KAY+DDI+LH +++T E IQ + DLV+EL AVGI+VNR K
Sbjct:  478 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGK 662          
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 3.170e-86
Identity = 134/185 (72.43%), Postives = 158/185 (85.41%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVR+WKPKLE IFREA+QFG AV GGVE+VAM+AQ VH TG+WV QTDCSNAFNTGKRTAIMAQAAKS+P+LV YIARCYD +PA A+Y MDSGERR ++C SGVQQGDG+GPPLF  IL+PI+LKL+ KY  L V  KAY+DDI+LH +++T E IQ + D+V+EL AVGI+VNR K
Sbjct:    4 RRLIAAGTVREWKPKLEEIFREADQFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGK 188          
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 1.460e-85
Identity = 136/186 (73.12%), Postives = 159/186 (85.48%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDI-TLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVR+WKPKLE IFREA+QFGVAVAGGVE+VAM+AQ VH TG+WV QTDCSNAFNTGKRTAIMAQAAKS+P+LV YIARCYD +PA A+Y MDSGERR ++C SGVQQGDG+GPPLF   L+PI+LKL+ KY  L V  KAY+DDI +LH +++T E IQ + DLV+EL AVGI+VNR K
Sbjct:   88 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGK 273          
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 2.960e-85
Identity = 131/185 (70.81%), Postives = 157/185 (84.86%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVR+WKPKLE IFREA+QFGVAV GGVE+VAM+AQ V  TG+WV QTDCSN  NTGKRTAIMAQAAKS+P+LV  IARCY+ +PA A+Y MDSGERR ++C SGVQQGDG+GPPLF  IL+PI+LKL+ KY  L V+ KAY+DDI+LH +++T E+IQ + DLV+EL AVGI+VNR K
Sbjct:  134 RRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCYE-LPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGK 317          
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 9.790e-85
Identity = 137/185 (74.05%), Postives = 160/185 (86.49%), Query Frame = 0
Query:    1 RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNWVFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDSGERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVDDITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK 185
            RRLIAAGTVR+WKPKLE IFREA+QFGVAVAGGVE+VAM+AQ VH TG+WV QTDCSNAFNTGKRTAIMAQAAKS+P+LV YIARCYD +PA A+Y MDSGERR ++C SGVQQGDG+GPPLF  IL+PI+LKL+ KY  L V  KAY+DDI+LH +++T E IQ + DLV+EL AVGI+VNR K
Sbjct:  457 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGK 641          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21388.6537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE1.700e-9887.03Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE1.670e-8973.51Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE1.490e-8872.97Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE1.190e-8673.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE1.320e-8671.35Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE1.980e-8674.05Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE3.170e-8672.43Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE1.460e-8573.12Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KT19_9PHAE2.960e-8570.81Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KMQ2_9PHAE9.790e-8574.05Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 37..185
e-value: 8.8E-13
score: 48.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..185
score: 10.188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig21388contigL-elsbetiae_contig21388:934..1488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig21388.6537.1mRNA_L-elsbetiae_contig21388.6537.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig21388 934..1488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig21388.6537.1 ID=prot_L-elsbetiae_contig21388.6537.1|Name=mRNA_L-elsbetiae_contig21388.6537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp
RRLIAAGTVRQWKPKLEGIFREANQFGVAVAGGVERVAMEAQRVHHTGNW
VFQTDCSNAFNTGKRTAIMAQAAKSLPNLVAYIARCYDAVPATAVYEMDS
GERRKLQCTSGVQQGDGVGPPLFSLILIPIILKLQGKYKPLRVASKAYVD
DITLHLQDLTEETIQAMKDLVNELAAVGIVVNRTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom