prot_L-elsbetiae_contig2131.6518.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2131.6518.1
Unique Nameprot_L-elsbetiae_contig2131.6518.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length201
Homology
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BLAST of mRNA_L-elsbetiae_contig2131.6518.1 vs. uniprot
Match: D8LHM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM7_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 1.960e-29
Identity = 79/184 (42.93%), Postives = 97/184 (52.72%), Query Frame = 0 
Query:   33 CASREDCGGDHWTCS-MGVCDCRFPFAGASCLENVC-GQLPSCDACREANNRATGGRGAEDGRGCVWGDGVCTVSAGPLYLEPLPLVCPEAAAEAAAV-------------------APSAGEPQPALP-QLWYGAGLPLVFLLICGGLLLFVAKCVRKWCRGSSDGPNYTPVDTANAADSSSG 194
            C S  DCGG+H  C   G+C CRFP+ G SC E+ C G+  SCDAC E+N       G      CVW +      + P  +  LP  C +AA                         APS  +PQ   P +L Y AGLPL+ +++ GGLL+FV KCVRK  RG SDGPNYTPVDTAN  +SS G
Sbjct: 1343 CTSDADCGGEHLACGGHGLCKCRFPWRGESCQEDACPGKFLSCDACHESNKDVPPAEGGSTFL-CVWAEDEGRCRSSPSTVSALP-ECSDAAXXXXXXXXXXXXXXXXXXXXXXXXXAPSLRDPQQQTPTELLYTAGLPLLVVVLVGGLLMFVTKCVRKCSRGGSDGPNYTPVDTANVEESSGG 1524
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BLAST of mRNA_L-elsbetiae_contig2131.6518.1 vs. uniprot
Match: A0A6H5K5H0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H0_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.110e-13
Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 0 
Query:  129 APSAGEPQPALP-QLWYGAGLPLVFLLICGGLLLFVAKCVRKWCRGSSDGPNYTPVDTANAADSSSG 194
            APS  +PQ  +P +L Y AGLPL+ +++ G LL+FVAKCVRK  RG S+GPNYTPVDTAN  +SS G
Sbjct: 1513 APSLRDPQQQMPTELLYTAGLPLLVVVLVGVLLVFVAKCVRKCSRGGSEGPNYTPVDTANVEESSGG 1579
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2131.6518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHM7_ECTSI1.960e-2942.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5H0_9PHAE1.110e-1361.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 165..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 142..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2131contigL-elsbetiae_contig2131:6032..7389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2131.6518.1mRNA_L-elsbetiae_contig2131.6518.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2131 6030..7389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2131.6518.1 ID=prot_L-elsbetiae_contig2131.6518.1|Name=mRNA_L-elsbetiae_contig2131.6518.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=201bp
EKNYGSGGDFEQAAEGQAGDNNNNNNNGNSNACASREDCGGDHWTCSMGV
CDCRFPFAGASCLENVCGQLPSCDACREANNRATGGRGAEDGRGCVWGDG
VCTVSAGPLYLEPLPLVCPEAAAEAAAVAPSAGEPQPALPQLWYGAGLPL
VFLLICGGLLLFVAKCVRKWCRGSSDGPNYTPVDTANAADSSSGAEGEGE
G
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