prot_L-elsbetiae_contig2131.6517.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2131.6517.1
Unique Nameprot_L-elsbetiae_contig2131.6517.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length68
Homology
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.270e-24
Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 0
Query:    4 FSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGLAQA 68
            +  +VKLTPGKQKRGKA+KQAIEVFSR++DTP S KGL+KG+TDNECV AMIGDVKVAVAGLAQA
Sbjct: 1281 YKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQA 1345          
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: A0A7S2HPI5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPI5_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.860e-13
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    1 VNRFSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGL 65
            + R+  +VKLTPG  K+G+A KQA++VF+R K+  P  + LIK V+DNE VQ +IG+VKV+  GL
Sbjct:   51 LQRYKYKVKLTPGSTKKGRAGKQALDVFTRMKECSPRERDLIKFVSDNELVQTIIGEVKVSTPGL 115          
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: A0A835ZCK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.410e-12
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 VNRFSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGL 65
            + R+  +VKLTPG  K+GKAAKQ++EVF R KD  P  K LIK +TD E V  M+GDVK++  GL
Sbjct: 1299 LQRYKFKVKLTPGTVKKGKAAKQSVEVFVRNKDAQPREKELIKALTDPEMVAVMLGDVKISTPGL 1363          
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: A0A061RK70_9CHLO (Nuclear export mediator factor nemf-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK70_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 7.390e-12
Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    1 VNRFSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGLAQA 68
            +N +  +VKLTPG+QK+GKAAK+A+++F R  +     K LI+ VTD E V  M+G V++++ GLA A
Sbjct:  172 LNGYKYRVKLTPGRQKKGKAAKEALDIFGRVNEATSREKELIRAVTDTEAVSGMVGPVQISMPGLAAA 239          
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: A0A482SK86_9ARCH (DUF814 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SK86_9ARCH)

HSP 1 Score: 67.0 bits (162), Expect = 2.340e-11
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    1 VNRFSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGLAQ 67
            + RF  +VKLTPG  K+GKA KQ +E+  R K+T  + +  I G+T+NE + AM+GDVK+A  GL Q
Sbjct: 1049 MQRFKYKVKLTPGTLKKGKAVKQVLELLPRVKETTETERSKINGITENEMLLAMVGDVKLAAPGLHQ 1115          
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: A0A8J6CBZ5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBZ5_DIALT)

HSP 1 Score: 66.6 bits (161), Expect = 3.210e-11
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    1 VNRFSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGLAQA 68
            V  +  +VKLTPG+QKRGKAAKQA+ +F+    +    + LI+ + DNE  QA+IG+VKV+ AG+AQA
Sbjct: 1277 VASYKHKVKLTPGQQKRGKAAKQAVALFANHSASSAHERELIRQIGDNELTQAIIGNVKVSAAGMAQA 1344          
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: A0A4D9CXT3_9STRA (NFACT-C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXT3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 9.830e-11
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    4 FSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGL 65
            +  +VKLTPG QK+GKAA QA+EVF R ++  P    LIKG+ DNE V A +GDV+V+  G+
Sbjct:  272 YKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACLGDVQVSKPGI 333          
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: W7TDM9_9STRA (Nuclear export mediator factor nemf n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDM9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.490e-10
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    4 FSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGL 65
            +  +VKLTPG QK+GKAA QA+EVF R ++  P    LIKG+ DNE V A +GDV+V+  G+
Sbjct:  380 YKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGI 441          
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: A0A8J9RKA8_9CHLO (Probable nuclear export mediator factor Nemf n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RKA8_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 5.330e-10
Identity = 29/64 (45.31%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    4 FSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGLAQ 67
            +  +VKLTPG Q++G+A +QAIE+ SRA D  P  + L+K + + E + AM+G+VK+A+ GL++
Sbjct: 1103 YKLKVKLTPGTQRKGRAGRQAIELLSRASDIAPRERDLLKAIPEMEVINAMVGNVKLAMPGLSK 1166          
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Match: A0A7S0NXC3_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NXC3_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 2.510e-9
Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    4 FSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNECVQAMIGDVKVAVAGLAQA 68
            +  +VKLTPG QK+GKAA+QAI VFS +    P  K L + + D+E V+ M+G+VKV  +GLAQA
Sbjct:  593 YKHRVKLTPGTQKKGKAARQAIGVFSAS--ATPREKELCQAIKDDELVRPMLGNVKVVASGLAQA 655          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2131.6517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHP2_ECTSI1.270e-2481.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2HPI5_9STRA1.860e-1352.31Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZCK8_9STRA1.410e-1255.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A061RK70_9CHLO7.390e-1247.06Nuclear export mediator factor nemf-like n=1 Tax=T... [more]
A0A482SK86_9ARCH2.340e-1149.25DUF814 domain-containing protein n=1 Tax=archaeon ... [more]
A0A8J6CBZ5_DIALT3.210e-1151.47Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A4D9CXT3_9STRA9.830e-1153.23NFACT-C domain-containing protein n=1 Tax=Nannochl... [more]
W7TDM9_9STRA1.490e-1053.23Nuclear export mediator factor nemf n=3 Tax=Nannoc... [more]
A0A8J9RKA8_9CHLO5.330e-1045.31Probable nuclear export mediator factor Nemf n=1 T... [more]
A0A7S0NXC3_9EUKA2.510e-952.31Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021846NFACT protein, C-terminalPFAMPF11923NFACT-Ccoord: 4..60
e-value: 7.2E-11
score: 41.9
NoneNo IPR availablePANTHERPTHR15239UNCHARACTERIZEDcoord: 2..67
NoneNo IPR availablePANTHERPTHR15239:SF6NUCLEAR EXPORT MEDIATOR FACTOR NEMFcoord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2131contigL-elsbetiae_contig2131:97..300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2131.6517.1mRNA_L-elsbetiae_contig2131.6517.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2131 97..300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2131.6517.1 ID=prot_L-elsbetiae_contig2131.6517.1|Name=mRNA_L-elsbetiae_contig2131.6517.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=68bp
VNRFSKQVKLTPGKQKRGKAAKQAIEVFSRAKDTPPSHKGLIKGVTDNEC
VQAMIGDVKVAVAGLAQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021846NFACT-C