prot_L-elsbetiae_contig2130.6514.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2130.6514.1
Unique Nameprot_L-elsbetiae_contig2130.6514.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length149
Homology
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BLAST of mRNA_L-elsbetiae_contig2130.6514.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.240e-6
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 0 
Query:    1 MVNVVSKKCTHHGCTKYPSYGNAGGR-AEYCRDHAEDGMV 39
            MV+VVSK+C H GCTK PSYGN G + AE C  HA  GMV
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40
[Close]
BLAST of mRNA_L-elsbetiae_contig2130.6514.1 vs. uniprot
Match: D8LNJ8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ8_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 8.000e-5
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0 
Query:    1 MVNVVSKKCTHHGCTKYPSYGNAGGR-AEYCRDHAEDGMV 39
            M++VVSK+C H GC K+PSYG    + AE+C +HA  GMV
Sbjct:    1 MIDVVSKRCAHSGCNKWPSYGMPPSKKAEFCANHARPGMV 40
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2130.6514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI1.240e-665.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LNJ8_ECTSI8.000e-555.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2130contigL-elsbetiae_contig2130:18826..19272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2130.6514.1mRNA_L-elsbetiae_contig2130.6514.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2130 18765..19340 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2130.6514.1 ID=prot_L-elsbetiae_contig2130.6514.1|Name=mRNA_L-elsbetiae_contig2130.6514.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp
MVNVVSKKCTHHGCTKYPSYGNAGGRAEYCRDHAEDGMVDVTHKTCTHHD
CTKRSSYGKAGGKKEFCGDHAEDGIVSVTKKHGMLSVGKRRSVDATVDGQ
QKRPRFVKEEAVEERVGAAAATTIVAKVGGTQPFMGLGKGQRGRQSSK*
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