prot_L-elsbetiae_contig213.6507.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig213.6507.1
Unique Nameprot_L-elsbetiae_contig213.6507.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: D7FQT5_ECTSI (SRP101, alpha subunit of the signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT5_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 9.290e-92
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0
Query:   13 GYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKALFG 157
            GYARDSSAVAREAVKHA EEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGR+HQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKALFG
Sbjct:  445 GYARDSSAVAREAVKHAAEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRYHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKALFG 589          
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: K8Z840_NANGC (Signal recognition particle receptor subunit alpha n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z840_NANGC)

HSP 1 Score: 224 bits (572), Expect = 4.890e-70
Identity = 104/144 (72.22%), Postives = 129/144 (89.58%), Query Frame = 0
Query:   13 GYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKALF 156
            GY +D +AVA+ A+K A ++G+D VL+DTAGRMQN EPLMRAL+KL+++N+P+LV+FVGEALVGNDG++QL +FNQALAN SP G+ HQIDG++LTKFDT+D KVGAALSMCYKTGQPILFVGTGQKYTHL+KLNVN ++  LF
Sbjct:  231 GYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 374          
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: A0A4D9D5H8_9STRA (SRP54 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5H8_9STRA)

HSP 1 Score: 224 bits (572), Expect = 3.010e-67
Identity = 104/144 (72.22%), Postives = 129/144 (89.58%), Query Frame = 0
Query:   13 GYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKALF 156
            GY +D +AVA+ A+K A ++G+D VL+DTAGRMQN EPLMRAL+KL+++N+P+LV+FVGEALVGNDG++QL +FNQALAN SP G+ HQIDG++LTKFDT+D KVGAALSMCYKTGQPILFVGTGQKYTHL+KLNVN ++  LF
Sbjct:  511 GYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654          
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: A0A7S1U981_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U981_9STRA)

HSP 1 Score: 216 bits (549), Expect = 4.460e-66
Identity = 104/145 (71.72%), Postives = 124/145 (85.52%), Query Frame = 0
Query:   13 GYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKALFG 157
            GYARD S+VA  A  HA E GYD +L+DTAGRMQNNEPLM+ALSKLI++N P+L LFVGEALVGNDG++QL MFN++LA+NSP G  H++DG++LTKFDTID KVGAALSM YKTG+PILFVGTGQKYTHL+ L+V  VI +LF 
Sbjct:  274 GYARDPSSVAAAAKVHARENGYDVLLVDTAGRMQNNEPLMKALSKLISDNRPDLTLFVGEALVGNDGIDQLMMFNESLADNSPPGTHHEVDGIMLTKFDTIDDKVGAALSMSYKTGKPILFVGTGQKYTHLKHLSVPAVINSLFS 418          
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: A0A0P1B7H3_PLAHL (Signal recognition particle receptor subunit alpha n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7H3_PLAHL)

HSP 1 Score: 216 bits (549), Expect = 2.720e-64
Identity = 104/143 (72.73%), Postives = 127/143 (88.81%), Query Frame = 0
Query:   13 GYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKAL 155
            GYA+D ++VA+EAVK+  E GYDCVLIDTAGRMQNNEPLMRAL+KL+++NEP+LVLFVGEALVGNDG++QL MF++ALA+ S     H+IDG+V+TKFDTID KVGAA+SM YKTGQPI+FVGTGQKYTHL+KLNV  V++ L
Sbjct:  458 GYAKDPASVAKEAVKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSKNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHL 600          
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: A0A7R9U3P7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3P7_9STRA)

HSP 1 Score: 213 bits (543), Expect = 5.030e-64
Identity = 104/152 (68.42%), Postives = 124/152 (81.58%), Query Frame = 0
Query:    6 QFNKIHTGYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKALFG 157
            Q +    GY+RD S+VA  A  HA E  YD +L+DTAGRMQNNEPLM+ALS+LI++N PEL +FVGEALVGNDG++QL MFNQALANN+P G F Q+DG++LTKFDTID KVGAALSM YKT +PILFVGTGQKYTHL+ L+V  VI +LF 
Sbjct:  380 QVDLFERGYSRDPSSVASAAKAHARENKYDVLLVDTAGRMQNNEPLMKALSQLISDNTPELTVFVGEALVGNDGIDQLMMFNQALANNAPPGTFQQVDGIILTKFDTIDDKVGAALSMSYKTSKPILFVGTGQKYTHLKHLSVPAVINSLFA 531          
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: H3G7F3_PHYRM (SRP54 domain-containing protein n=23 Tax=Phytophthora TaxID=4783 RepID=H3G7F3_PHYRM)

HSP 1 Score: 215 bits (547), Expect = 5.360e-64
Identity = 104/143 (72.73%), Postives = 126/143 (88.11%), Query Frame = 0
Query:   13 GYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKAL 155
            GYA+D ++VA+EAVK+  E GYDCVLIDTAGRMQNNEPLMRAL+KL++ NEP+LVLFVGEALVGNDG++QL MF++ALA+ S     H+IDG+V+TKFDTID KVGAA+SM YKTGQPI+FVGTGQKYTHL+KLNV  V++ L
Sbjct:  458 GYAKDPASVAKEAVKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLAMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHL 600          
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: A0A5D6Y7Z3_9STRA (SRP54 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7Z3_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.720e-63
Identity = 104/143 (72.73%), Postives = 126/143 (88.11%), Query Frame = 0
Query:   13 GYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKAL 155
            GYA+D +AVA+EAVK+  E G+DCVLIDTAGRMQNNEPLMRAL+KL++ NEP+LVLFVGEALVGNDG++QL MF++ALA+ S     H+IDG+V+TKFDTID KVGAA+SM YKTGQPI+FVGTGQKYTHL+KLNV  V++ L
Sbjct:  466 GYAKDPAAVAKEAVKYGTENGFDCVLIDTAGRMQNNEPLMRALAKLVSLNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHL 608          
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: A0A7S3Y919_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y919_HETAK)

HSP 1 Score: 206 bits (523), Expect = 2.140e-63
Identity = 100/146 (68.49%), Postives = 126/146 (86.30%), Query Frame = 0
Query:   13 GYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRF-HQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKALFG 157
            GYA+D +AVA  A++HA E+G+D VLIDTAGRMQNN PLMRAL+KL+ + +P+ VLFVGEALVGNDG++QL+MF++ALA  +P GR   ++DG+VLTKFDTIDTKVGAALSM Y+TGQP++FVGTGQKYTHLR+LN   ++ ALFG
Sbjct:  168 GYAKDPAAVAVAALEHAREQGFDAVLIDTAGRMQNNAPLMRALAKLVGDAQPDRVLFVGEALVGNDGIDQLRMFDEALAAFAPPGRPPRRVDGIVLTKFDTIDTKVGAALSMTYQTGQPVVFVGTGQKYTHLRRLNAGAIVDALFG 313          
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Match: A0A3M6VSC8_9STRA (SRP54 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSC8_9STRA)

HSP 1 Score: 212 bits (540), Expect = 5.520e-63
Identity = 101/143 (70.63%), Postives = 125/143 (87.41%), Query Frame = 0
Query:   13 GYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNYVIKAL 155
            GYA+D ++VA+EA+K+  + GYDCVLIDTAGRMQNNEPLMRAL+KL++ NEP+LVLFVGEALVGNDG++QL MF++ALA+ S     H+IDG+V+TKFDTID KVGAA+SM YKTGQPI+FVGTGQKYTHL+KLN   V++ L
Sbjct:  456 GYAKDPASVAKEAIKYGADHGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNARTVLRHL 598          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig213.6507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT5_ECTSI9.290e-9298.62SRP101, alpha subunit of the signal recognition pa... [more]
K8Z840_NANGC4.890e-7072.22Signal recognition particle receptor subunit alpha... [more]
A0A4D9D5H8_9STRA3.010e-6772.22SRP54 domain-containing protein n=2 Tax=Monodopsid... [more]
A0A7S1U981_9STRA4.460e-6671.72Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0P1B7H3_PLAHL2.720e-6472.73Signal recognition particle receptor subunit alpha... [more]
A0A7R9U3P7_9STRA5.030e-6468.42Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
H3G7F3_PHYRM5.360e-6472.73SRP54 domain-containing protein n=23 Tax=Phytophth... [more]
A0A5D6Y7Z3_9STRA1.720e-6372.73SRP54 domain-containing protein n=1 Tax=Pythium br... [more]
A0A7S3Y919_HETAK2.140e-6368.49Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3M6VSC8_9STRA5.520e-6370.63SRP54 domain-containing protein n=2 Tax=Peronospor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 3..157
e-value: 4.5E-29
score: 112.6
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 6..156
e-value: 1.6E-31
score: 109.5
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 130..143
NoneNo IPR availableGENE3D3.40.50.300coord: 1..156
e-value: 3.0E-51
score: 176.0
NoneNo IPR availablePANTHERPTHR43134FAMILY NOT NAMEDcoord: 12..155
NoneNo IPR availablePANTHERPTHR43134:SF1SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAcoord: 12..155
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig213contigL-elsbetiae_contig213:4953..7693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig213.6507.1mRNA_L-elsbetiae_contig213.6507.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig213 4577..8312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig213.6507.1 ID=prot_L-elsbetiae_contig213.6507.1|Name=mRNA_L-elsbetiae_contig213.6507.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MQMATQFNKIHTGYARDSSAVAREAVKHAEEEGYDCVLIDTAGRMQNNEP
LMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALANNSPAGRFH
QIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTGQKYTHLRKLNVNY
VIKALFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000897SRP54_GTPase_dom
IPR027417P-loop_NTPase