prot_L-elsbetiae_contig2129.6501.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2129.6501.1
Unique Nameprot_L-elsbetiae_contig2129.6501.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length410
Homology
BLAST of mRNA_L-elsbetiae_contig2129.6501.1 vs. uniprot
Match: D8LFX6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX6_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 7.460e-17
Identity = 49/102 (48.04%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    1 MPSKCNHGDCTTGPSYGLL-GTKKAEYCIKHAKQGMVNVRDKRCAYENVALRGRRPAVMEAYRCKTRPSYAMAG-EKPAFCSKHALPGMVDVLSKTCAREAC 100
            MPSKC    C T PS+GL  G +K  +C  HAK+GM+NVRD+ C +                 C TRPSYA AG +KP FC  HA  G VDVLS+ CAR+ C
Sbjct:    1 MPSKCASPGCPTNPSFGLNDGKRKVLFCRGHAKEGMINVRDRTCCHPGG--------------CPTRPSYAEAGSKKPEFCVLHAPKGTVDVLSRRCARKGC 88          
BLAST of mRNA_L-elsbetiae_contig2129.6501.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.460e-6
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    3 SKCNHGDCTTGPSYGLLGTKKAEYCIKHAKQGMVNVRDKRC 43
            S+C H +CT  P+YG+ G+KK E+C +HA+ GMVNV +KRC
Sbjct:    2 SQCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 42          
BLAST of mRNA_L-elsbetiae_contig2129.6501.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.510e-6
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    3 SKCNHGDCTTGPSYGLLGTKKAEYCIKHAKQGMVNVRDKRC 43
            S+C H +CT  P+YG+ G+KK E+C +HA+ GMVNV +KRC
Sbjct:   62 SQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 102          
BLAST of mRNA_L-elsbetiae_contig2129.6501.1 vs. uniprot
Match: A0A6H5JZM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZM2_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.740e-5
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    5 CNHGDCTTGPSYGLLGTKKAEYCIKHAKQGMVNVRDKRC 43
            C   DCTT PS+G  G+KKAE+C KH+K  MVNV DK+C
Sbjct:   47 CQEPDCTTRPSFGEYGSKKAEFCSKHSKPAMVNVVDKKC 85          
BLAST of mRNA_L-elsbetiae_contig2129.6501.1 vs. uniprot
Match: D7FY22_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY22_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 1.950e-5
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    5 CNHGDCTTGPSYGLLGTKKAEYCIKHAKQGMVNVRDKRCAY 45
            C    CT  PSYG+ G+KKAE+C KH+K GM NV  KRC +
Sbjct:   31 CQEHGCTARPSYGIDGSKKAEFCSKHSKPGMTNVTKKRCGH 71          
BLAST of mRNA_L-elsbetiae_contig2129.6501.1 vs. uniprot
Match: A0A6H5KY67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY67_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 3.390e-5
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    5 CNHGDCTTGPSYGLLGTKKAEYCIKHAKQGMVNVRDKRCAY 45
            C    CT  PSYG+ G KKAE+C KH+K GM+N+  KRC +
Sbjct:   27 CQEHGCTVRPSYGIDGCKKAEFCSKHSKPGMINLTKKRCGH 67          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2129.6501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LFX6_ECTSI7.460e-1748.04EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FI73_ECTSI1.460e-656.10EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE3.510e-656.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZM2_9PHAE1.740e-561.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY22_ECTSI1.950e-556.10EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KY67_9PHAE3.390e-553.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2129contigL-elsbetiae_contig2129:8347..12408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2129.6501.1mRNA_L-elsbetiae_contig2129.6501.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2129 8334..14110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2129.6501.1 ID=prot_L-elsbetiae_contig2129.6501.1|Name=mRNA_L-elsbetiae_contig2129.6501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=410bp
MPSKCNHGDCTTGPSYGLLGTKKAEYCIKHAKQGMVNVRDKRCAYENVAL
RGRRPAVMEAYRCKTRPSYAMAGEKPAFCSKHALPGMVDVLSKTCAREAC
PLKPSFGAPGTKKAEFCMEHAGEGMVNVRLKKCAHSGCGTMPTYGVLGTK
KADFCVRHARDGMVNIHGQKCRHPSCFKQPSYGIAGTKKAEACSAHAYPG
MVDVKNKRCAHPGGCLKGPSYAAPGARSPVFCLDHAEDGMVDIRRKKRCS
HPGCSEQGSYSENDGRLVVVCRLHGAKTDASTRARARTRKRAPPPAPNIV
NIGGPADGLWPGGGPTAGASAGAAGAVDGSSGAGGGGLASCNATPLALVG
ARAAKRGRQDAAAARAAAAAAEPSDSDGDDIDVCGPGDGEGDGIFGGSQR
QLGDGSIRI*
back to top