prot_L-elsbetiae_contig2127.6493.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2127.6493.1
Unique Nameprot_L-elsbetiae_contig2127.6493.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length493
Homology
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BLAST of mRNA_L-elsbetiae_contig2127.6493.1 vs. uniprot
Match: D8LFN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN0_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 1.820e-82
Identity = 169/376 (44.95%), Postives = 191/376 (50.80%), Query Frame = 0 
Query:    7 HTGPELRQGLALFRVVNRTGLQIREDIALDSEPCGRLYAGDVFCVNDSSTVIHHQGSHRSGKRGKRGIVRLARLHMVAPRIGWVSGSSKWVSKFQEGG-RPGPIPLRSTLSDNCPVAMVKPSEGRSTARSPTATKGDRYQPEVRGEERYQEASVSTREGPESRVTTPRSRWLHSRGGVWPVAVSSIPGPTYFPAASGATGSHSSAANGVAFPKEQRFLSNATRYLSKDHERQARGLFSPGPAMYVGHDDVMPLAPRPPLTAPGSAHRCPCAEAPGISGGGGAVDCLHRGLLRARRALTAGPLGGQSARRQRVSGGAATHTPYIGIKEREAADKLVGKAKAGATGAPVMRLPISRRGVREGPDGCFFTRMGAASPGP 381
            ++GPELRQGL LFRV+NRTGLQIR  + L+SEPCGRL+AGDVFCVN  S V HHQ      KRGK   +RL RLHMV P  GWV+ SSKWV KFQ G  RPGPIPL+STL DNCPV+MVKPS+                                           P  R   SR GVWPV V SIPGP Y P+ SGA   HSSA  GV FPKE+RFLSN+TR       RQ                                                                    P+   +A        A   +PYIG+KE+EAADK+VGKA AG TG PV+R  +S RG REGPDGCF TRMGA SPGP
Sbjct:   20 NSGPELRQGLDLFRVINRTGLQIRRGVGLNSEPCGRLFAGDVFCVNRCSAVPHHQ----ENKRGKMRQLRLTRLHMVQPYTGWVTWSSKWVEKFQGGDTRPGPIPLKSTLRDNCPVSMVKPSDA-----------------------------------------CPVRRGASSRDGVWPVDVKSIPGPKYLPSVSGANRDHSSAEYGVVFPKERRFLSNSTR-------RQ--------------------------------------------------------------------PVSSTTA--------AGAGSPYIGLKEQEAADKIVGKANAGTTGCPVIRTLVSSRGEREGPDGCFVTRMGAESPGP 267
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2127.6493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFN0_ECTSI1.820e-8244.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2127contigL-elsbetiae_contig2127:6842..9519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2127.6493.1mRNA_L-elsbetiae_contig2127.6493.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2127 6842..9519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2127.6493.1 ID=prot_L-elsbetiae_contig2127.6493.1|Name=mRNA_L-elsbetiae_contig2127.6493.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=493bp
MLVCIIHTGPELRQGLALFRVVNRTGLQIREDIALDSEPCGRLYAGDVFC
VNDSSTVIHHQGSHRSGKRGKRGIVRLARLHMVAPRIGWVSGSSKWVSKF
QEGGRPGPIPLRSTLSDNCPVAMVKPSEGRSTARSPTATKGDRYQPEVRG
EERYQEASVSTREGPESRVTTPRSRWLHSRGGVWPVAVSSIPGPTYFPAA
SGATGSHSSAANGVAFPKEQRFLSNATRYLSKDHERQARGLFSPGPAMYV
GHDDVMPLAPRPPLTAPGSAHRCPCAEAPGISGGGGAVDCLHRGLLRARR
ALTAGPLGGQSARRQRVSGGAATHTPYIGIKEREAADKLVGKAKAGATGA
PVMRLPISRRGVREGPDGCFFTRMGAASPGPARHFPECSSISAKGCPVFA
APAALDPVEWERQNKVPGQPRTPQLVKHNAARSKTSQVHHRWPSYTHMGD
RGRISGKLGQDSPGPGAVNIAGHDPFRPSSFLKTDVCHPPPAS
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