prot_L-elsbetiae_contig21233.6478.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig21233.6478.1
Unique Nameprot_L-elsbetiae_contig21233.6478.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length177
Homology
BLAST of mRNA_L-elsbetiae_contig21233.6478.1 vs. uniprot
Match: A0A6H5KRZ0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ0_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 4.320e-30
Identity = 75/140 (53.57%), Postives = 92/140 (65.71%), Query Frame = 0
Query:   33 PCPVGVTTLPVSSTSEASELSEALLCSGAGEFEVEWIGEVLVTGTISVSNSTSLKITGSESIALPQAVVDGGDEVQLFVVDAGSSLQLSGLSIQRGVASDGGAVEVRDSSHLTAIDCSFSNNSGG-------EHCGRLPQ 165
            PC  GVT L VSST+EA EL+  L CSGAG+FEVEW GEV+VT T +VS  TSLKITGS       AV+DGG  VQLFVV+ GS L+L  +S+ R   S G AV+  +S  +TA DC+FS+N+G        E  G LP+
Sbjct:   37 PCADGVTALSVSSTAEALELTNELECSGAGDFEVEWSGEVVVTKTFAVSTGTSLKITGS---IFDGAVIDGGGAVQLFVVNDGSQLELDSVSVVR---SFGTAVDASES-QVTATDCTFSSNNGSSSIAGKHEREGILPE 169          
BLAST of mRNA_L-elsbetiae_contig21233.6478.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.160e-27
Identity = 77/162 (47.53%), Postives = 102/162 (62.96%), Query Frame = 0
Query:   15 LFQACALLLSVLGV--TMSAPCPVGVTTLPVSSTSEASELSEALLCSGAGEFEVEWIGEVLVTGTISVSNSTSLKITGSESIALPQAVVDGGDEVQLFVVDAGSSLQLSGLSIQRGVAS--------DGGAVEVR-DSSHLTAIDCSFSNNSGGEHCGRLPQ 165
            L+ + A LL ++G+    +A C V V    VS+T EASELSEALLCSGAGEFEVEW GEVL+   I +SN + +K+TG+ +    +AV+DGGD V LF V+ GS+L+L  LS+ RGVA+         GGAV +R D   LTA  CSF  N+  +  G +  
Sbjct:    3 LYASLAALLGMVGMPHAQAATCSVAVDARVVSTTEEASELSEALLCSGAGEFEVEWQGEVLLERPIFISNGSYVKVTGASA---GEAVIDGGDAVVLFNVNDGSTLELDALSLVRGVATYTATYSYGGGGAVILRSDDCILTASSCSFIGNNAIDSGGAISS 161          
BLAST of mRNA_L-elsbetiae_contig21233.6478.1 vs. uniprot
Match: D7FPF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF6_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.150e-19
Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 0
Query:   15 LFQACALLLSVLGVTMS-APCPVGVTTLPVSSTSEASELSEALL-CSGAGEFEVEWIGEVLVTGTISVSNSTSLKITGSESIALPQAVVDGGDEVQLFVVDAGSSLQLSGLSIQRGVASDGGAVEVRDSSHLTAID 148
            + + C  LLS++G+  S + C  G+TTL VS+T+EA ELS++L  C+G+GEFEV W G VL++ TI+V N T+L + G   +    AV+DGGD + LF V  GS L L G+S+  G   + G V +  SS L A +
Sbjct:    4 VLKTCVSLLSIVGLAKSQSSCSEGITTLNVSTTAEALELSDSLNNCAGSGEFEVNWSGNVLLSQTITVQNRTALTVRG---VGAEAAVIDGGDAISLFHVFNGSVLMLDGVSLIGGSGVESGGVGLCCSSTLLAAN 136          
BLAST of mRNA_L-elsbetiae_contig21233.6478.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 7.300e-18
Identity = 54/130 (41.54%), Postives = 79/130 (60.77%), Query Frame = 0
Query:   34 CPVGVTTLPVSSTSEASELSEALLCSGAGEFEVEWIGEVLVTGTISVSNSTSLKITGSESIALPQAVVDGGDEVQLFVVDAGSSLQLSGLSIQRGVASDGGAVEVRDSSHLTAIDCSFSNNSGGEHCGRL 163
            C V  +   VS T ++++L+ ++LCS  G+F V+W  EV VT TI VS+ TSL ITG+     P A+ DGG   QLFVV+ GS+L LS +++  G A  GGA+   DSS   + + SF++N    + G +
Sbjct:  220 CSVVTSFRTVSRTEDSADLANSVLCSN-GDFIVQWDEEVFVTATIRVSDGTSLNITGTG----PGAIADGGGSTQLFVVEGGSTLHLSDMTLSNGNALSGGAISAADSSVSFSGNTSFNSNFANFYGGAI 344          
BLAST of mRNA_L-elsbetiae_contig21233.6478.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.820e-15
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 0
Query:    8 SARSNRNLFQAC--ALLLSVLGVTMSAPCPVGVTTLPVSSTSEASELSEALLCSGAGEFEVEWIGEVLVTGTISVSNSTSLKITGSESIALPQAVVDGGDEVQLFVVDAGSSLQLSGLSIQRGVASDGGAVEVRDSSHLTAIDCSFSNN 154
            ++R    LFQA     L++V     + PC +  +   V+S+ +A  L+  L CS  G+F V+W+GEV+VT TI V+N TSL ITG  S     A  +G    QLFVV+ GSS+  + ++   G AS GGA+ V +SS   +   +F+ N
Sbjct:   48 ASRLQMGLFQALNVGFLVAVATAQATLPCSLDTSLWTVASSEDAVTLATLLRCSD-GDFAVQWVGEVIVTETIRVTNGTSLNITGDGS----GATANGDHTTQLFVVEGGSSMHCTDMTFANGNASSGGAMFVGESSVRFSGATAFTGN 191          
BLAST of mRNA_L-elsbetiae_contig21233.6478.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 5.410e-12
Identity = 51/122 (41.80%), Postives = 68/122 (55.74%), Query Frame = 0
Query:   34 CPVGVTTLPVSSTSEASELSEALLCSGAGEFEVEWIGEVLVTGTISVSNSTSLKITGSESIALPQAVVDGGDEVQLFVVDAGSSLQLSGLSIQRGVASDGGAVEVRDSSHLTAIDCSFSNNS 155
            C +  +T  + +T +A+ L+ AL     G   V W+GEV+V  TI V+N  SL ITG    A P AV DG +  QLF VD GS L LSG++I  G A+ GGA+        +  D SFS N+
Sbjct:   25 CSLDASTFIMDTTDQATLLATALGFLDGG-LSVCWVGEVIVADTIRVTNGKSLNITG----AGPGAVADGQNVTQLFYVDGGSRLHLSGMAIAHGSAAYGGAI------FASRSDVSFSGNT 135          
BLAST of mRNA_L-elsbetiae_contig21233.6478.1 vs. uniprot
Match: A0A6H5JRC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC8_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 3.720e-9
Identity = 38/102 (37.25%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    7 SSARSNRNLFQACALLLSVLGVTMS-APCPVGVTTLPVSSTSEASELS--EALLCSGAGEFEVEWIGEVLVTGTISVSNSTSLKITGSESIALPQAVVDGGD 105
            ++AR+   +   C  LLS++ +  S + C  G+ TLPVS+T++   L+      C+G+GEFEV W G VL++  I+V N T L + G   +    AV+D GD
Sbjct:    8 TAARATSTVLNTCVSLLSIVELAKSQSSCSEGIITLPVSTTAKDWNLATRSTTACTGSGEFEVNWSGNVLLSQIITVQNRTVLTVRG---VGAEAAVIDEGD 106          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21233.6478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KRZ0_9PHAE4.320e-3053.57Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JWI3_9PHAE1.160e-2747.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF6_ECTSI1.150e-1944.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1E0_ECTSI7.300e-1841.54EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
D7FM10_ECTSI1.820e-1538.26Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
A0A6H5KX12_9PHAE5.410e-1241.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRC8_9PHAE3.720e-937.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.745
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 73..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig21233contigL-elsbetiae_contig21233:1334..1864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig21233.6478.1mRNA_L-elsbetiae_contig21233.6478.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig21233 729..2145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig21233.6478.1 ID=prot_L-elsbetiae_contig21233.6478.1|Name=mRNA_L-elsbetiae_contig21233.6478.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=177bp
MDILAWSSARSNRNLFQACALLLSVLGVTMSAPCPVGVTTLPVSSTSEAS
ELSEALLCSGAGEFEVEWIGEVLVTGTISVSNSTSLKITGSESIALPQAV
VDGGDEVQLFVVDAGSSLQLSGLSIQRGVASDGGAVEVRDSSHLTAIDCS
FSNNSGGEHCGRLPQLIVMFFFKWGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence