prot_L-elsbetiae_contig2123.6477.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2123.6477.1
Unique Nameprot_L-elsbetiae_contig2123.6477.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length285
Homology
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BLAST of mRNA_L-elsbetiae_contig2123.6477.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 3.150e-11
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 MVDVVSKRCGHQGCNKRPVYGVEGTKKAELCSQHARKGM 39
            MVDVVSKRCGH GC KRP YG +G+KKAELC+QHA +GM
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGM 39
[Close]
BLAST of mRNA_L-elsbetiae_contig2123.6477.1 vs. uniprot
Match: D8LNJ8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ8_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.390e-7
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    1 MVDVVSKRCGHQGCNKRPVYGVEGTKKAELCSQHARKGM 39
            M+DVVSKRC H GCNK P YG+  +KKAE C+ HAR GM
Sbjct:    1 MIDVVSKRCAHSGCNKWPSYGMPPSKKAEFCANHARPGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2123.6477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI3.150e-1176.92EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LNJ8_ECTSI2.390e-766.67EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2123contigL-elsbetiae_contig2123:18144..18998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2123.6477.1mRNA_L-elsbetiae_contig2123.6477.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2123 16441..19032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2123.6477.1 ID=prot_L-elsbetiae_contig2123.6477.1|Name=mRNA_L-elsbetiae_contig2123.6477.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=285bp
MVDVVSKRCGHQGCNKRPVYGVEGTKKAELCSQHARKGMVDVVNKKCGHQ
GCDTKPSYGVEGTKTAELCSQHAREGMVDVVSKTCGHQGCNAKPSYGVEG
TNKREFCSQHAREGMVDVVNKRCGHQGCNTKPSYGVEGSEEYTFCARHAT
AGMVSRKGAPARSEGGGRGNGGREHERGCCELDVDAPVRGSATKKRARQA
DAVRPVSIDVKEEEEHDDGATGSCASTTTASSKRARPIGFTPLVPLAVKA
EATRKRAATHATNSSSELESESEVATETGIAVSA*
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